Grape genetic research in the age of pangenomes

Climate change and the growing need to reduce the use of phytosanitary products demand the exploration of disease-resistant grape varieties and/or adapted to drought conditions.

Grapevines are susceptible to freezing damage at temperatures below -5°F during the winter season. Preventing winter injury to grapevines is a major challenge in many grape-producing regions. Conventional methods such as hilling-up soil over graft unions have been developed as winter protection methods for preventing vine loss. However, these practices have drawbacks such as soil erosion, vine damage and crown gall development.

The evaluation of new grapevine genotypes regarding their potential to produce high quality wines is the time limiting factor in the process of grapevine breeding. Hence, the development of quality-related markers useable in marker-assisted selection (MAS) as well as in prediction models for this bottleneck trait will tremendously enhance breeding efficiency. In extensive studies a training set of a segregating white wine F1 population (150 F1 genotypes = POP150; `Calardis Musqué´ x `Villard Blanc´) was deeply phenotyped and genotyped for model development and QTL analysis.

In this study, a soil mapping methodology at subplot level (scale 1:5000) for vineyard soils was developed. The aim of this mapping method was to establish mapping units, which could be used as basic units for ‘terroir’ characterisation and vineyard management (precision viticulture).

Meta-analysis (MA) is a method that allows statistical synthesis of the results of several similar individual studies (Figure 1). This term was introduced by Glass in 1976 as a useful tool for the scientific community to pool and summarise the enormous amount of information collected in the literature.