terclim by ICS banner
IVES 9 IVES Conference Series 9 Data deluge: Opportunities, challenges, and lessons of big data in a multidisciplinary project

Data deluge: Opportunities, challenges, and lessons of big data in a multidisciplinary project

Abstract

Grapevine powdery mildew resistance is a key target for grape breeders and grape growers worldwide. The driver of the USDA-NIFA-SCRI VitisGen3 project is completing the pipeline from germplasm identification to QTL to candidate gene characterization to new cultivars to vineyards to consumers. This is a common thread across such projects internationally. We will discuss how our objectives and approaches leverage big data to advance this initiative, starting with genomics and computer vision phenotyping for gene discovery and genetic improvement. To manage and maintain resistances for long-term sustainability, growers will be trained through our nation-wide extension and outreach plan. Ultimately, consumers drive adoption of new varieties, and our socioeconomic research using eye-tracking will be briefly described. Across this multi-disciplinary research effort, big data presents opportunities, challenges, and lessons.

DOI:

Publication date: June 13, 2024

Issue: Open GPB 2024

Type: Article

Authors

Lance Cadle-Davidson1,2*, Matt Clark3, Dario Cantu4,5, Chengyan Yue3,6, Kaitlin Gold2, Yu Jiang2, Qi Sun7, Kate Fessler3

1 USDA-ARS Grape Genetics Research Unit, Geneva, NY, USA
2 School of Integrative Plant Science, Cornell AgriTech, Cornell University, Geneva, NY, USA
3 Department of Horticultural Science, Univ. of Minnesota, Saint Paul, MN, USA
4 Department of Viticulture and Enology, University of California Davis, Davis, CA, USA
5 Genome Center, University of California Davis, Davis, CA, USA
6 Department of Applied Economics, Univ. of Minnesota, Saint Paul, MN, USA
7 BRC Bioinformatics Facility, Institute of Biotechnology, Cornell University, Ithaca, NY, USA

Contact the author*

Keywords

Disease resistance, Grape breeding, Genomics, Computer vision, Consumer behavior

Tags

IVES Conference Series | Open GPB | Open GPB 2024

Citation

Related articles…

Zonazione dell’area viticola doc durello

Il lavoro di zonazione riveste un ruolo importante per capire le potenzialità e la vocazionalità di una specifica area viticola. La viticoltura dovrebbe essere vista in funzione dell’obiettivo enologico che si vuole realizzare e quindi particolare importanza riveste il risultato delle vinificazioni delle uve provenienti dai vigneti delle diverse aree della zona di produzione oggetto d’indagine. La zonazione dell’area a DOC Monti Lessini Durello ha preso in esame la varietà “Durella”, vitigno autoctono del territorio, che rappresenta la maggior parte della produzione vitivinicola della zona.

Identification of aroma markers in amarone wines

Amarone is an Italian red wine produced in the Valpolicella area, in north-eastern Italy. Due to its elaboration with withered grapes, Amarone is a rather unique example of dry red wine. However, there is very limited data so far concerning the volatile composition of commercial Amarone wines, which also undergo a cask aging of 2-4 years before release. The present work aims at characterizing the aroma composition of Amarone and to elucidate the relationships between chemical composition and sensory characters. The analysis of 17 Amarone commercial wines from the same vintage (2015) was carried out by means of Gas Chromatography-Mass Spectrometry (GC-MS) and extracted by Solid Phase Extraction (SPE) and Solid Phase Micro Extraction (SPME). In addition, the sampled wines were subjected to a sensory evaluation in the form of sorting task.RESULTS: 70 volatile compounds were successfully identified and quantified, 30 of which were present in concentrations above their odor thresholds in all the samples. Using the odor activity value (OAV), the compounds that potentially contribute to Amarone perceived aroma are b-damascenone, ethyl and isoamyl acetate, ethyl esters (hexanoate, octanoate, butanoate, 3-methybutanoate), 4-ethyl guaiacol, 3-methylbutanoic acid, dimethyl sulfide (DMS), eugenol, massoia lactone, 1,4-cineol, TDN, cis/trans-whisky lactone. In certain samples, high OAVs were also observed for 4-ethyl phenol and 1,8-cineole.Results from the sorting task sensory analysis showed three clusters formed.

Evaluation de différents clones du Chardonnay pendant la maturation dans un terroir viticole du Friuli-Venezia Glulia (Nord-Est de l’Italie)

La diffusion récente et “explosive” du Chardonnay dans pratiquement toutes les zones de culture viticole du monde a fait penser, à tort, que cette variété s’adapte facilement à toutes les conditions pédo-climatiques ou presque. Cette thèse a été confirmée par la grande faculté d’adaptation dont a fait preuve le vignoble et par la popularité dont jouit le vin auprès des consommateur du monde entier.

Identifying New Zealand Sauvignon blanc terroirs

The concept of terroir is well established in the ‘old world’ wine industry but its use is still relatively new in New Zealand. Marlborough Sauvignon blanc has become a benchmark

Zoning methods in relation to the plant

The characterization of the plant is the obliged pathway between the environment and the product. The responses of the plant amplify or reduce the variations of the environment, while determining directly the type and the quality of the products. These results are inscribed inside the Viticultural Terroir Unit (VTU). VTU is the complex interaction between the Basic Terroir Unit or BTU (interaction mesoclimate x soil/subsoil), the genotype (variety x rootstock), the management system, the oenological technologies. Thus, at the most complex level, a global biological triptych is found again : environment (source) x plant (structure) = produced and exchanged substances.