terclim by ICS banner
IVES 9 IVES Conference Series 9 International Congress on Grapevine and Wine Sciences 9 2ICGWS-2023 9 Genetic study of wild grapevines in La Rioja region

Genetic study of wild grapevines in La Rioja region

Abstract

Since the mid-1980s, several surveys have been carried out in La Rioja to search for populations of the sylvestrisgrapevine subspecies (Vitis vinifera L. subsp. sylvestris Gmelin). The banks of the Ebro River and its tributaries (Alhama, Cidacos, Leza, Iregua, Najerilla, Oja and Tirón rivers), as well as the surrounding vegetation of their valleys have been covered. So far, all the populations found are alluvial, forming part of the riparian vegetation of the Najerilla (the first reported population in La Rioja [1]), Iregua, and the vicinity of Oja valleys. Nevertheless, doubts arose from the beginning about the ‘sylvestris purity’ of some of these wild vines. In this work, leaves and/or cuttings from 83 vines have been used for genetic analyses: 63 vines were sampled in the wild in La Rioja region (17 from Najerilla banks, 43 from Iregua banks, and 3 from Agualinos stream, tributary of the Oja river), and 20 vines were sampled in the grapevine sylvestris collection of the University of La Rioja, originally collected as wild vines from the Najerilla valley. DNAs were extracted and genotyped at 6 microsatellite and 240 SNP markers. A total of 58 different genotypes were found, 20 in the Najerilla population, 36 in the Iregua population and 2 in the Oja population. These genotypes were included in a large genetic structure analysis of more than 2.800 genotypes representing worldwide sylvestrisand sativa subspecies. More than 84% of the wild samples from La Rioja showed a high membership coefficient to the sylvestris population, supporting their sylvestris condition. A local analysis focused on genotypes of cultivated and wild vines found in La Rioja separated them into two main clusters, with a clear division between sylvestris and cultivated vines. Some wild vine genotypes were found in intermediate positions between these two groups, indicating the existence of an introgression of the sativa gene pool into the sylvestris population, constituting an additional threat to the sylvestris subspecies.

Acknowledgements: This work is part of the project “Diversidad genética en la vid y adaptación al cambio climático” (PID2020-120183RB-I00), funded by MCIN / AEI /10.13039/501100011033.

1)  De Toda F. M. and J. C. Sancha (1999) Characterization of Wild Vines in La Rioja (Spain). Am. J. Enol. Vitic. 50: 443-446, doi: 10.5344/ajev.1999.50.4.443.

DOI:

Publication date: October 9, 2023

Issue: ICGWS 2023

Type: Poster

Authors

Javier Ibáñez1*, Javier Tello1, Fernando Martínez de Toda1, José Manuel Valle2, Álvaro Rodríguez-Miranda2, Carlos Alvar Ocete3, José Miguel Martínez-Zapater1, Rafael Ocete3

1 Instituto de Ciencias de la Vid y del Vino (CSIC, UR, CAR). Finca La Grajera, Ctra. de Burgos Km. 6, 26007 Logroño, La Rioja. Spain
2 Built Heritage Research Group (GPAC), University of the Basque Country (UPV/EHU), Vitoria- Gasteiz. Spain
3 Freelance, Tirgo, La Rioja. Spain

Contact the author*

Keywords

introgression, genetic structure, microsatellite, SNP, sylvestris, Vitis vinifera, wild

Tags

2ICGWS | ICGWS | ICGWS 2023 | IVES Conference Series

Citation

Related articles…

Grapevine adaptation to drought and resistance to Neofusicoccum parvum, causal agent of Botryosphaeria dieback

The sustainability of viticulture in response to climate change has been addressed mainly considering agronomic impacts, such as water management and diseases, either separately or together.
In grapevines, there is strong evidence that different genotypes respond differently to biotic and abiotic stresses. A screening was conducted on various local cultivars in response to drought and Neofusicoum parvum infection aiming to evaluate their susceptibility to abiotic stress and resistance to fungal diseases.

The use of plasma activated water in barrel disinfection: impact on oak wood composition

The use of barrels is a practice that improves the quality of wines. The porous structure of wood favors the accumulation of microorganisms that can deteriorate the quality of wines so that barrel cleaning and sanitizing treatments are essential. The burning of sulphur discs has been the most common practice in winemaking because ots biocide effect. Nevertheless, its effectiveness is still insufficient and it is harmful for human health.

Water and nutritional savings shape non-structural carbohydrates in grapevine (Vitis vinifera L.) cuttings

Global changes and sustainability challenge researchers in saving water and nutrients. The response of woody crops, which can be forced at facing more drought events during their life, is particularly important. Vitis vinifera can be an important model for its relevance in countries subjected to climate changes and its breeding, requiring cuttings plantation and strong pruning.

Differences in metabolism among species and hybrids of the genus Saccharomyces during wine fermentation unveiled by multi-omic analysis 

Yeast species S. cerevisiae, S. uvarum, S. kudriavzevii and their hybrids present clear metabolic differences, even when we compared S. cerevisiae wine versus wild strain. These species and hybrids produced significantly higher amounts of glycerol, organic acids, 2,3-butanediol, and 2-phenyl ethanol and a reduction of the ethanol yield, properties very interesting in the sector to deal with climate change effects. To understand the existing differences, we have used several omics techniques to analyze the dynamics of the (intra- and extracellular) metabolomes and/or transcriptomes of representative strains of S. cerevisiae, S. uvarum, S. kudriavzevii, and hybrids.

Effect of ultraviolet B radiation on pathogenic molds of grapes

The fungicidal effect of UV-C radiation (100-280 nm wavelength) is well known, but its applicability for the control of pathogenic molds of grapes is conditioned by its effect on the host and by the risks inherent in its handling[1].
As an alternative, the effect in vitro of UV-B radiation (280-315 nm) on the main pathogenic molds of grapes has been studied: Botrytis cinerea, Aspergillus niger, Penicillium expansum and Rhizopus stolonifer.