terclim by ICS banner
IVES 9 IVES Conference Series 9 Genome wide association mapping of phenology related traits in Vitis vinifera L

Genome wide association mapping of phenology related traits in Vitis vinifera L

Abstract

Climate change, with rise in temperatures, is leading to an advance in the dates of phenological stages, with a loss in quality of the grape final product. Therefore, the understanding of the genetic determinants driving the phenological stages of flowering, veraison and the interval between them, represents a target for the development of grapevine’s cultivar adapted to the changing environment.
Here we conducted a GWA study to identify SNPs significantly associated to flowering time, veraison time and to the interval among them. A germplasm collection (CREA-VE in Susegana, Treviso, Italy) including 649 grapevine’s cultivar representing 365 unique genotypes was considered. Cultivars were phenotyped for flowering time and veraison time along 11 years. Flowering-veraison intervals were also derived and distribution for all traits was inspected and eventually corrected. For this analysis we have built a genetic dataset including 6679 SNPs. SNPs were either recovered from litterature or integrated by genotyping through grapevine Illumina SNPChip 18K and used for evaluating the genetic structure. MLM analysis conducted independently for the three different phenological traits identified a list of few significantly associated SNPs. Among the three traits flowering time yielded the highest number of associated SNPs. For each trait SNPs consistently associated across more years were found. Moreover partially overlapping SNPs associated both to veraison time and flowering-veraison time interval were found. Interestingly most of the associated SNPs co-localized with QTL regions already known either for flowering or veraison traits in grapevine. Putative candidate genes underlying such regions are discussed.

DOI:

Publication date: June 13, 2024

Issue: Open GPB 2024

Type: Poster

Authors

Giada Bolognesi1, Pietro Delfino1, Chiara Broccanello1, Riccardo Mora1, Martina Marini1, 2, Massimo Gardiman2, Mirella Giust2, Diego Tomasi2, Manna Crespan2, Diana Bellin1*

1Department of Biotechnology, University of Verona, Verona, Italy
2 CREA Research Centre for Viticulture and Enology, Conegliano (TV), Italy

Contact the author*

Keywords

Climate change, GWAS, phenology, candidate genes

Tags

IVES Conference Series | Open GPB | Open GPB 2024

Citation

Related articles…

Egg allergens in wine. Validation of a new automated method for ovalbumin quantification

Ovalbumin (ova), a natural clarifying protein, is particularly suitable for clarifying red wines. It helps improve the tannic and polyphenolic stability of the wine by removing the most astringent tannins and contributing to soften and refine the structure. Ova binds to suspended particles, proteins, polysaccharides, and, to a lesser extent, tannins through electrostatic and hydrophobic interactions, forming large complexes that can be removed from the wine through fining and/or filtration before bottling.

Influenza dell’esposizione del vigneto sulla maturazione dell’uva

Lo studio è stato condotto in vigneti commerciali di Vitis vinifera cv Nebbiolo localizzati in Piemonte, Italia del Nord-Ovest, intorno alla sommità di una collina. L’obiettivo dello studio è stato di determinare come l’esposizione del vigneto possa influenzare il comportamento vegetativo della vite, il manifestarsi delle fasi fenologiche, e la cinetica di maturazione dell’uva con particolare riguardo all’accumulo di antociani e flavonoli.

Evaluation of a biological foliar fertilization system, in the production, agronomic and quality characteristics of three wine grape varieties

Evaluation of the fertility management practices in wine grape varieties production. Wine grape represents one of the most important productions in Greece with major impact to the socioeconomic characteristics of the country. The objective of this study is to evaluate, with the support of Geospatial Technologies, the potential effects of an innovative foliar fertilizer system, which is composed of three parts: a mineral fertilizer in a micronized formulation, a biostimulant as an enhancing factor of the process and, an amino acid compound (SANOVITA concept). The study was established at a collaborative, private vineyard, in the area of Trilofos-Thessaloniki, at the region of Northern Greece.

What to do to solve the riddle of vine rootstock induced drought tolerance

Climate change will increase the frequency of water deficit situation in some European regions, by the increase of the evapotranspiration and the reduction of rainfalls during the growing cycle. This requires finding ways of adaptation, including the use of plant material which is more tolerant to drought. In addition to the varieties used as scions that result in the typicality of wines, rootstocks constitute a relevant way of adaptation to more stressful environmental conditions.

Innovations on red winemaking process by ultrasound technology

High power ultrasound has been recently recognized one of the most promising technologies in winemaking processes, especially after the recent OIV resolution, concerning the application of ultrasounds on crushed grapes to promote the extraction of skin compounds.