terclim by ICS banner
IVES 9 IVES Conference Series 9 Rootstock x environment interaction shapes shoot system phenotypic variation in grafted ‘Chambourcin’

Rootstock x environment interaction shapes shoot system phenotypic variation in grafted ‘Chambourcin’

Abstract

Recent advances in phenomics and transcriptomics have the enhanced capacity for understanding how clonally propagated perennial crops like grapevines respond to their environments seasonally and over the course of multiple years. Because most grapevines are grafted, above-ground grapevine traits reflect scion genotype and its interaction with the local environment. In addition, traits expressed by the scion reflect rootstock genotype and how that rootstock is interacting with its environment seasonally and across years. To investigate rootstock x environment interaction on shoot systems in grafted grapevines we characterized comprehensive phenotypic variation in an experimental vineyard in Mount Vernon, Missouri, USA where the grapevine cultivar ‘Chambourcin’ is growing on its own roots and is grafted to three different rootstocks (‘1103P’, ‘3309C’, ‘SO4’).  This set of four combinations is replicated 72 times in a randomized block experimental design with an irrigation treatment. Over the course of three years we quantified leaf elemental concentration, leaf transcriptome, leaf metabolome and epigenome, among others. Analyses in the ‘Chambourcin’ vineyard reveal extensive and dynamic phenotypic variation in ‘Chambourcin’ that reflects complex interactions among rootstock genotype, irrigation, season, and year. Specific effects of rootstock genotype on gene expression and elemental concentration were detected and vary with season and year. Variation in ion concentrations is also influenced by leaf position along the vine. This comprehensive, multi-year project demonstrates the importance of root system variation for shoot system morphology and suggests future exploration of rootstock genotypic diversity might offer a novel source of variation for shoot system phenotypic manipulation. 

DOI:

Publication date: June 14, 2024

Issue: Open GPB 2024

Type: Poster

Authors

Allison Miller, Mani Awale, Anne Fennell, Zach Harris, Laszlo Kovacs, Misha Kwasniewski, Jason Londo, Zoe Migicovksy, Brigette Williams

Saint Louis University and the Danforth Plant Science Center; University of Missouri; South Dakota State University; Taylor Geospatial Institute; Missouri State University; Penn State University

Keywords

grafting, phenotyping, transcriptomics, epigenomics, ionomics 

Tags

IVES Conference Series | Open GPB | Open GPB 2024

Citation

Related articles…

Investigating water stress-related seasonal and spatial patterns and the possible links with juice and wine compositional parameters

The mapping of spatial variability in vineyards offers the potential to implement zonal management strategies with the aim to optimize economic benefits and increase sustainability by managing natural resources, such as water used for irrigation, more optimally. This study characterized the (natural) variability in plant water status in a commercial Cabernet Sauvignon block, using remote sensing techniques, and identified the impact of this variability on the yield, and juice and wine composition. From the field data collected over two growing seasons, we demonstrated that remote sensing techniques are a practical and powerful tool for mapping spatial variability within vineyard blocks.

Metabolomic insights into wine’s sensory identity: unveiling climate-driven changes in aroma composition

Wine, a sensitive and intricate agricultural product, is being affected by climate change, which accelerates grapevine phenological stages and alters grape composition and ripening. This influences the synthesis of key aroma compounds, shaping wine’s sensory attributes [1]. The complex aroma profile, resulting from compound interactions, presents a metabolomics challenge to identify these indicators and their environmental change responses, which is being addressed using diverse analytical techniques.

Remote sensing and radiometric techniques applied to vineyards in two regions of Rio Grande do Sul, Brazil

The observation of Earth by satellites has demonstrated the feasibility of establishing differences between plant species, from their spectral features. The reflectance spectrum of vine plants follows this trend, being possible to identify vineyards in satellite images, among other species.

Geological influences on terroir development

Geological influences on terroir development

Evidence for terroir effect associated with botrytisation relatively to compounds implicated in typical aromas of noble rot sweet wines

Recent studies have demonstrated the role of certain lactones, particularly 2-nonen-4-olide, and volatile thiols (3-sulfanylhexan-1-ol) in the over ripped aromas of noble rot sweet wines (Stamatopoulos et al. 2014ab). These compounds are partly formed during the maturation and under the activity of B. cinerea on grapes. This research was carried out in the vineyard of Sauternes with aim to better understand their genesis depending on the grape over-ripening on two different soil types during 3 vintages. Thus, the study was conducted, with the Sémillon grape, during vintages 2012, 2014 & 2015, at 4 stages of over-maturation of the grapes (healthy, pourri plein, pourri roti, pourri roti + 15 days) considering two vineyard plots with different soil characteristics (calcosol & peyrosol) planted with the 315 Sémillon clone and grafted on 101-14 rootstock respectively in 1981 and 1980 and cultivated with the same vineyard management. Volatile lactones were assayed by liquid-liquid extraction followed by GC/MS analysis and the precursors of 3-sulfanylhexanol by an adaptation of the method by Capone et al. 2010 (SPE-
UPLC/FTMS).