terclim by ICS banner
IVES 9 IVES Conference Series 9 Rootstock x environment interaction shapes shoot system phenotypic variation in grafted ‘Chambourcin’

Rootstock x environment interaction shapes shoot system phenotypic variation in grafted ‘Chambourcin’

Abstract

Recent advances in phenomics and transcriptomics have the enhanced capacity for understanding how clonally propagated perennial crops like grapevines respond to their environments seasonally and over the course of multiple years. Because most grapevines are grafted, above-ground grapevine traits reflect scion genotype and its interaction with the local environment. In addition, traits expressed by the scion reflect rootstock genotype and how that rootstock is interacting with its environment seasonally and across years. To investigate rootstock x environment interaction on shoot systems in grafted grapevines we characterized comprehensive phenotypic variation in an experimental vineyard in Mount Vernon, Missouri, USA where the grapevine cultivar ‘Chambourcin’ is growing on its own roots and is grafted to three different rootstocks (‘1103P’, ‘3309C’, ‘SO4’).  This set of four combinations is replicated 72 times in a randomized block experimental design with an irrigation treatment. Over the course of three years we quantified leaf elemental concentration, leaf transcriptome, leaf metabolome and epigenome, among others. Analyses in the ‘Chambourcin’ vineyard reveal extensive and dynamic phenotypic variation in ‘Chambourcin’ that reflects complex interactions among rootstock genotype, irrigation, season, and year. Specific effects of rootstock genotype on gene expression and elemental concentration were detected and vary with season and year. Variation in ion concentrations is also influenced by leaf position along the vine. This comprehensive, multi-year project demonstrates the importance of root system variation for shoot system morphology and suggests future exploration of rootstock genotypic diversity might offer a novel source of variation for shoot system phenotypic manipulation. 

DOI:

Publication date: June 14, 2024

Issue: Open GPB 2024

Type: Poster

Authors

Allison Miller, Mani Awale, Anne Fennell, Zach Harris, Laszlo Kovacs, Misha Kwasniewski, Jason Londo, Zoe Migicovksy, Brigette Williams

Saint Louis University and the Danforth Plant Science Center; University of Missouri; South Dakota State University; Taylor Geospatial Institute; Missouri State University; Penn State University

Keywords

grafting, phenotyping, transcriptomics, epigenomics, ionomics 

Tags

IVES Conference Series | Open GPB | Open GPB 2024

Citation

Related articles…

Grape ripening delaying with combined use of leaf removal and natural shading in Manto negro (Vitis vinifera L.) under deficit irrigation

The increasing frequency of heat waves during grape ripening presents challenges for the production of high-quality wine grapes. This underscores the significance of developing effective irrigation and canopy management techniques to optimize both yield and grape quality. A field experiment was carried out during 2021 and 2022 using Manto negro wine grapes to study the effect of two irrigation strategies and different light exposure levels on grape quality. In a four-block experimental vineyard at Bodega Ribas in Mallorca, two irrigation treatments—moderate and severe deficit irrigation—were implemented. Within each irrigation plot, three light exposure treatments were randomly assigned, encompassing exposed clusters from pea size, non-exposed clusters, and shaded clusters after softening.

Chenin Blanc Old Vine character: evaluating a typicality concept by data mining experts’ reviews and producers’ tasting notes

Concepts such as typicality are difficult to demonstrate using the limited set of samples that can be subjected to sensory evaluation. This is due both to the complexity of the concept and to the limitations of traditional sensory evaluation (number of samples per session, panel fatigue, the need for multiple sessions and methods, etc.). On the other hand, there is a large amount of data already available, accumulated through many years of consistent evaluation. These data are held in repositories (such as Platter’s Wine Guide in the case of South Africa Wine, wineonaplatter.com) and in technical notes provided by the producers.

REMEDIATION OF SMOKE TAINTED WINE USING MOLECULARLY IMPRINTED POLYMERS

In recent years, vineyards in Australia, the US, Canada, Chile, South Africa and Europe have been exposed to smoke from wildfires. Wines made from smoke-affected grapes often exhibit unpleasant smoky, ashy characters, attributed to the presence of smoke-derived volatile compounds, including volatile phenols (which occur in free and glycosylated forms). Various strategies for remediation of smoke tainted wine have been evaluated. The most effective strategies involve the removal of smoke taint compounds via the addition of adsorbent materials such as activated carbon, which can either be added directly or used in combination with nanofiltration. However, these treatments often simultaneously remove wine constituents responsible for desirable aroma, flavour and colour attributes.

Functional dissection of NPR3 by genome editing highlights its role in grapevine defense and root symbiosis

New Plant Breeding Techniques (NPBTs), and particularly genome editing, represent a powerful avenue to enhance disease resilience in perennial crops.

Estimation of chemical age of red wines with the use of Fourier transform infrared spectroscopy (FT-IR) and chemometrics

The color of a red wine is one of the most important parameters of its quality, giving much information on its status, such as the grape variety used or the winemaking style. As the result of a complex equilibrium between different forms of anthocyanins and polymerization reactions which occur over the course of time, color can also serve as an indication of a wines’ age. For this purpose the “chemical age” i and ii indexes have been introduced by Somers in 1977. The chemical age index i measures the color absorbance after the addition of acetaldehyde while chemical index ii provides an indication of how much of the total red pigments are resistant to SO2 bleaching.