terclim by ICS banner
IVES 9 IVES Conference Series 9 OIV 9 OIV 2024 9 Orals - Viticulture, table grapes, dried grapes and unfermented grape products 9 Plastid genomics of Vitis vinifera L. for understanding the molecular basis of  grapevine (Vitis vinifera L.) domestication

Plastid genomics of Vitis vinifera L. for understanding the molecular basis of  grapevine (Vitis vinifera L.) domestication

Abstract

The precise molecular mechanisms underlying the domestication of grapevine (Vitis vinifera L.) Are still not fully understood. In the recent years, next-generation sequencing (NGS) of plastid genomes has emerged as a powerful and increasingly effective tool for plant phylogenetics and evolution. To uncover the biological profile of the grapevine domestication process comprehensively, an investigation should encompass both the cultivated varieties (v. Vinifera subsp. Vinifera) and their wild ancestors (V. vinifera subsp. Sylvestris) across all potential sites of their distribution and domestication. The main goals of the presented research were as follows: 1) assessment of the genetic diversity of wild and cultivated grapevines from Europe and mediterenean basein (wild ones of France, Germany, Italy, Spain, Portugal, Hungary, Morocco) and georgia, caucasus (both cultivated and wild), american and asian spieces (i.e. V. Californica, v. Thunbergii) through complete chloroplast dna illumina sequencing (more than 30 plastoms in total); 2) in silico assembly and annotation of the sequenced plastid genomes; 3) comparative genomics and phylogenetics of a wide range of Vitis vinifera l. Plastoms. The results revealed the dominance of the gta plastid haplotype in europe and the mediterranean basin, except of portuguese wild grapevine; the diversity of plastid haplotypes in the south caucasus, especially in georgia, is once again demonstrated, highlighting the potential role of this geographic region in the grapevine domestication process; in each analyzed plastomes, a total of 128 genes (protein- coding, tRNA, and rRNA genes) were annotated. Furthermore, comparative genomics approaches were employed to evaluate the phylogenetic relationships among different Vitis vinifera L. Chloroplast genomes.

Publication date: November 18, 2024

Issue: OIV 2024

Type: Article

Authors

Ia Pipia¹, Vazha Tabidze¹, Thierry Lacombe²

¹ Agricultural University of Georgia, Institute of Molecular Genetics, David Aghmashenebeli Alley 240, Tbilisi, Georgia
² AGAP, Université de Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France

Contact the author*

Tags

IVES Conference Series | OIV | OIV 2024

Citation

Related articles…

Hanseniaspora uvarum and high hydrostatic pressure for improving wine aging on lees

Non-saccharomyces yeasts gained an increased interest in winemaking during the last decades, due to their ability to produce relevant amounts of polysaccharides. Moreover, a significant release of glutathione into the wine during fermentation was also observed with these strains, as well as an improvement of color stability and wine aroma profile. Valuable results have been obtained by hanseniaspora spp. concerning the release of polysaccharides and the production of acetic esters, mainly during fermentation.

Mousy off-flavor detection: a rapid LCMS/MS method

These days, consumers are interested in food products linked to the environment and the concept of naturalness. They prefer “free” products, such as those with no pesticide residues or no added sulfur dioxide (so2) in wines. In fact, so2 is the most widely used preservative in winemaking, as it has multiple properties at low cost: it is antioxidant, antioxidasic and antimicrobial.

Sucessful education program about responsible wine consumption in germany as part of the national implementation of wine in moderation

Considering that „prevention requires information”, in 2007, the european education program wine in moderation (wim) started. The common message of responsible and only moderate wine consumption is implemented in each participating country, adapted to national circumstances. In germany, besides recruiting new wim members from the wine sector, the deutsche weinakademie focusses also on information and education of future wine makers and cellar men in professional schools. The seminars cover basic information about the existing legal framework (youth protecting law, drink driving laws, etc.), the self regulation code of conduct for commercial communications (advertising) of alcoholic beverages as well as the health effects of alcoholic beverages, and of wine in particular.

The legal concept of “cultural heritage” to refurbish the wine sector’s priorities

Following the latest oiv global report (april 26, 2024), the prevailing perception of wine consumption finds itself undergoing one of its most challenging adjustments. It’s plausible to anticipate a shift in the scope of pdo wines towards more human-centered products (wells and stiefel, 2019), necessitating the entire sector to adapt strategies to public interest patterns (touzeau, 2010: 17-31). Previously, a dominant notion of cultural property underscored the value of wine regions; the primary interest revolved around estate owners and retailers, along with vigneron tales.

Understanding the physiological responses of Sauvignon blanc vines to sequential extreme weather events: implications for vineyard management in a changing climate

Climate plays a predominant role in vines’ growth and productivity and several environmental variables are already known to pose challenges to grapevine production and the horticultural industry as a whole. In this context, a number of extreme weather events already occurring and expected to occur in the next decades even more frequently and with higher magnitude results from current climate change scenario. The aim of this study was to examine the physiological responses of roots, leaves, and berries of Vitis vinifera cv. Sauvignon blanc to consecutive and combined stressors simulated in a semi-controlled environment.