Macrowine 2021
IVES 9 IVES Conference Series 9 Data fusion approaches for sensory and multimodal chemistry data applied to storage conditions

Data fusion approaches for sensory and multimodal chemistry data applied to storage conditions

Abstract

AIM: The need to combine multimodal data for complex samples is due to the different information captured in each of the techniques (modes). The aim of the study was to provide a critical evaluation of two approaches to fusing multi-modal chemistry and sensory data, namely, multiblock multiple factor analysis (MFA) and concatenation using principal component analysis (PCA).

METHODS: Wines were submitted to sensory analysis using Pivot©Profile (Thuillier et al. 2015) and chemical analysis in four modes: antioxidant measurements (AM), volatile compounds composition (VCC), ultraviolet-visible light (UV-Vis) spectrophotometry (Mafata et al. 2019), and infra-red (IR) spectroscopy. Correspondence analysis (CA), principal component analysis (PCA), and multiple factor analysis (MFA) were used to model data under the data analysis steps involving data cleaning, visualizing, modelling and evaluation (Pagès 2004). Percentage explained variation (%EV) and regression vector (RV) coefficients were used as comparative evaluation parameters between data models (Abdi 2007).

RESULTS: IR spectral data were used as an example of the assessment of the need for data cleaning/pre-processing. Similarities in MFA and high RV coefficients indicated that the raw (unprocessed data) could be used for the data fusion. High RV coefficients and MFA proximity between the antioxidants and UV-Vis measurements indicated an overlap between the type of information contained in the two. The differences between the information captured in each of the five modes can be seen in the different measurements, from the knowledge of the theory/ ontext behind the technique, and statistically. Statistically, the differences are measured and visualised by a lack of overlap (redundancy) in the MFA and its accompanying cluster analysis. 

CONCLUSIONS

The %EV when performing PCA are higher than with MFA, a consequence of fusing big data sets from various modes and not necessarily a direct result of the relationships among the data sets. Therefore, the %EV was ruled out as a reliable measure of the differences in informational value between MFA and PCA fusion strategies. RV coefficients, of which MFA were highest, were the best measurements of the performance of data fusion approaches. MFA demonstrated greater appropriateness as a statistical tool for fusing multi-modal data.

DOI:

Publication date: September 13, 2021

Issue: Macrowine 2021

Type: Article

Authors

Jeanne Brand

South African Grape and Wine Research Institute, Department of Viticulture and Oenology, Stellenbosch University, South Africa,Mpho, MAFATA, South African Grape and Wine Research Institute, Department of Viticulture and Oenology, Stellenbosch University, South Africa  Martin, KIDD, Centre for Statistical Consultation, Stellenbosch University, South Africa Andrei, MEDVEDOVICI, Faculty of Chemistry, University of Bucharest, Romania Astrid, BUICA, South African Grape and Wine Research Institute, Department of Viticulture and Oenology, Stellenbosch University, South Africa

Contact the author

Keywords

data fusion; sensory evaluation; chemical composition; white wines; storage

Citation

Related articles…

Novel biorefinery step for grape marc valorisation: polysaccharides extraction by subcritical water

The exploitation of food by-products has garnered significant attention over the past few decades, particularly within the framework of the European Green Deal.

Can grapevine tolerance to bunch rot be directly induced by groundcover management?

Botrytis bunch rot occurrence is the most important limitation for the wine industry in humid environments. The effect of grapevine vegetative growth on bunch rot expression results from direct effects (cluster architecture, nitrogen status among others) and indirect ones (via microclimate). Previous studies of our group showed strong differences in bunch rot incidence between floor management treatments: cover crop (CC) vs weed-free strips under the trellis with herbicide (H). We observed that in some circumstances this reduction in bunch rot incidence occurred without major vine growth differences among treatments. The aim of the present study was to test the general hypothesis that other factors unrelated to grapevine vegetative expression could be more relevant to grapevine susceptibility to bunch rot.

Copper contamination in vineyard soils of Bordeaux: spatial risk assessment for the replanting of vines and crops

Copper (Cu) is widely and historically used in viticulture as a fungicide against mildew. Cu has a strong affinity for soil organic matter and accumulates in topsoil horizons. Thus, Cu may negatively affect soil organisms and plants, consequently reducing soil fertility and productivity. The Bordeaux vineyards have the largest vineyard surfaces (26%) within French controlled appellation and a great proportion of French wine production (around 5 million hl per year). Considering the local context of vineyard surfaces decreasing (vine uprooting) and possible new crop plantation, the issue of Cu potential toxicity rises. Therefore, the aims of this work are firstly to evaluate the Cu contamination in vineyard soils of Bordeaux, secondly to produce a risk assessment map for new vine or crop plantation. We used soil analyses from several local studies to build a database with 4496 soil horizon samples. The database was enhanced by means of pedotransfer functions in order to estimate the bioaccessible (EDTA-extractable) Cu in soils of samples without measurements. From this database, 1797 georeferenced samples with CuEDTA concentrations in the topsoil (0-50 cm depth) were used for kriging interpolation in order to produce the spatial distribution map of CuEDTA in vineyard soils. Then, the spatial distribution of Cu was crossed with vine uprooting surfaces and municipality boundaries. CuEDTAconcentrations ranged from 0.52 to 459 mg/kg and showed clear anomalies. Our results from spatial analysis showed that almost 50% of vineyard soil surfaces have CuEDTA concentrations higher than 30 mg/kg (moderate risk for new plantation) and 20% with concentrations higher than 50 mg/kg (high risk for new plantation). A decision-support map based on municipalities was realised to provide a simple tool to stakeholders concerned by land use management.

Understanding graft union formation by using metabolomic and transcriptomic approaches during the first days after grafting in grapevine

Since the arrival of Phyloxera (Daktulosphaira vitifolia) in Europe at the end of the 19th century, grafting has become essential to cultivate Vitis vinifera. Today, grafting provides not only resistance to this aphid, but it used to adapt the cultivars according to the type of soil, environment, or grape production requirements by using a panel of rootstocks. As part of vineyard decline, it is often mentioned the importance of producing quality grafted grapevine to improve vineyard longevity, but, to our knowledge, no study has been able to demonstrate that grafting has a role in this context. However, some scion/rootstock combinations are considered as incompatible due to poor graft union formation and subsequently high plant mortality soon after grafting. In a context of climate change where the creation of new cultivars and rootstocks is at the centre of research, the ability of new cultivars to be grafted is therefore essential. The early identification of graft incompatibility could allow the selection of non-viable plants before planting and would have a beneficial impact on research and development in the nursery sector. For this reason, our studies have focused on the identification of metabolic and transcriptomic markers of poor grafting success during the first days/week after grafting; we have identified some correlations between some specialized metabolites, especially stilbenes, and grafting success, as well as an accumulation of some amino acids in the incompatible combination. The study of the metabolome and the transcriptome allowed us to understand and characterise the processes involved during graft union formation.

Vine field monitoring using high resolution remote sensing images: segmentation and characterization of rows of vines

A new framework for the segmentation and characterization of row crops on remote sensing images has been developed and validated for vineyard monitoring. This framework operates on any high-resolution remote sensing images since it is mainly based on geometric information. It aims at obtaining maps describing the variation of a vegetation index such as NDVI along each row of a parcel.