terclim by ICS banner
IVES 9 IVES Conference Series 9 International Congress on Grapevine and Wine Sciences 9 2ICGWS-2023 9 Characterization of a Sémillon clonal population: exploring genetic diversity, metabolomic profiles, and phenotypic variations

Characterization of a Sémillon clonal population: exploring genetic diversity, metabolomic profiles, and phenotypic variations

Abstract

Sémillon is a cultivated grape variety known for contributing to dry and sweet white wine production. However, only seven approved clones have been officially recognized in France[1]. In this study, we aimed to characterize the genetic diversity and metabolomic profiles of a Sémillon clonal population, shedding light on the potential variations within this important grape variety.

Through Illumina whole genome sequencing of 53 Sémillon clones, we observed various genetic variations, including single nucleotide polymorphisms (SNPs), providing comprehensive insights into their diversity and genomic variations. Additionally, metabolic profiling of berries was established with a combination of chemical and Liquid Chromatography-Mass Spectrometry (LC-MS) analysis, allowing to quantify key quality-related parameters such as pH, acidity, sugar content and volatile thiol precursor compounds. Remarkably, our findings revealed significant variations among Sémillon clones, leading to their placing in three distinct clusters.

Moreover, phenotypic evaluations highlighted variations in mid-veraison dates, cluster yield, and berry weight. These findings have practical implications for winemakers and vineyard managers, enabling informed decisions in selecting specific clones with desirable traits to achieve desired wine styles and adapt to specific environments and market demands.

To unravel the underlying mechanisms behind the observed metabolomic and phenotypic variation within this Sémillon clonal population, comprehensive investigations of global metabolome profiles, epigenetic variations, and virome of the Sémillon clones will be conducted. Through the implementation of multi-omics approaches, we aim to obtain a comprehensive understanding of the Sémillon clonal population, unraveling complex regulatory networks and identifying factors that drive the unique characteristics of clones. This integrative approach will expand our knowledge beyond individual components and provides valuable insights into the intricate interplay among key players at various biological levels.

Acknowledgements: This study received financial support from the French government, to the University of Bordeaux as an Initiative of Excellence, under the France 2030 plan, for the GPR Bordeaux Plant Sciences.

References:

1) Catalogue of grapevines cultivated in France. http://plantgrape.plantnet-project.org

DOI:

Publication date: October 3, 2023

Issue: ICGWS 2023

Type: Article

Authors

Maryam Khalili1*, Pierre-François Bert1, Jean Pascal Goutouly1,2, Armelle Marais3, Thierry Candresse3, Maria Lafargue1, Christel Renaud1, Philippe Darriet4, Ghislaine Hilbert-Masson1, Philippe Gallusci1,Pierre Pétriacq3, Sabine Guillaumie1, Nathalie Ollat1, Josep Valls Fonayet4, Cécile Tibon4 and Eric Gomès1

1 EGFV, Univ. Bordeaux, Bordeaux Sciences Agro, INRAE, ISVV, 33140 Villenave d’Ornon, France
2 Unité Expérimentale Vigne Bordeaux 1442, INRAE, 33140 Villenave d’Ornon, France

3 Univ. Bordeaux, INRAE, UMR 1332 BFP, 33140 Villenave D’Ornon, France
4 Enology, Univ. Bordeaux, Bordeaux Sciences Agro, INRAE, ISVV, 33140 Villenave d’Ornon, France

Contact the author*

Keywords

Sémillon, genomics, metabolomics, diversity

Tags

2ICGWS | ICGWS | ICGWS 2023 | IVES Conference Series

Citation

Related articles…

The combined use of Lachancea thermotolerans and lactic bacteria in wine technology

The production of most red wines that are sold involves an alcoholic fermentation carried out by yeasts of the Saccharomyces genus, and a subsequent fermentation carried out by lactic bacteria of the Oenococus oeni species after the first one is fully completed. However, the traditional process can face complications, which can be more likely in grape juices with high levels of sugar and pH. Because of climate change, these situations are more frequent in the wine industry. The main hazards in those scenarios are halts or delays in the alcoholic fermentation or the growth of unwanted bacteria while the alcoholic fermentation is not done yet and the wine still has residual sugars.

Physico-chemical properties of vine pruning residues with potential as enological additive

Grapes are one of the world’s primary fruit crops, and pruning activities generate high amounts of annual wood wastes [1]. These pruning shoots contain valuable phenolic compounds and could have numerous potential applications [1,2]. Consequently, the aim of this work was to evaluate the physico-chemical properties of vine pruning residues with potential as enological additives. For this purpose, grapevine shoots from 12 varieties grown in Chile were collected during the winter of 2021.

Conventional and alternative pest management strategies: a comparative proteomic study on musts

In a context of sustainable agriculture, “agroecological immunity” is an emerging concept to reduce the use of chemical pesticides to protect crops against pathogens. This alternative strategy aims to combine different levers including the use of “bio”solutions. These include biocontrol products, some of which being plant defense elicitors, as well as products authorized in organic farming such as copper or sulfur. In vineyards, depending on climate conditions, powdery and downy mildews can be devastating diseases.

REGAVID a decision tool to deficit irrigation in a temperate climate (DO Monterrei – Spain)

In temperate climates, such as in the North of Spain, the use of irrigation in the vineyard has not been required, due to the usual rainfall from June to August. In some large vineyards, irrigation management has been carried out, based on occasional support irrigation, or for the application of nutrients (fertigation). Currently it is necessary to implement decision support models to manage irrigation water in real time and avoid misuse of a scarce resource. Moreover, quality standards must be achieved, as in the previous rainfed viticulture.

Stomatal abundance in grapevine: developmental genes, genotypic variation, and physiology

Grapevine cultivation is threatened by the global warming, which combines high temperatures and reduced rainfall, impacting in wine quality and even plant survival. Breeding for varieties resilient to these challenges must address plant traits such as tolerance to supraoptimal temperatures and optimized water use efficiency while minimizing productivity and quality losses. Stomatal abundance (SA) determines the maximum leaf potential for transpiration and thus water loss and cooling. Since SA results from a developmental process during leaf emergence and growth, knowledge on the genetic control of this process would provide specific targets for modification.