terclim by ICS banner
IVES 9 IVES Conference Series 9 Open-GPB 9 Open-GPB-2024 9 Flash - Abiotic interactions 9 Drought affects vineyard soil microbiome: approach to select micro-organisms adapted to drought

Drought affects vineyard soil microbiome: approach to select micro-organisms adapted to drought

Abstract

Climate transition with frequent heat waves and long drought periods threatens grapevine productivity and wine quality in the Mediterranean regions. Microorganisms are known to contribute to plant fitness and to stimulate plant resilience against biotic and abiotic factors.  
In this work, it was assessed the impact of long-term drought on soil microbiome associated to grapevine in open field in Alentejo, renowned Portuguese wine region.
Soil and plant tissues of drought tolerant Syrah cultivar exposed to three irrigation levels (100%- FI,  50%-DI ETc; rain-fed–NI) for 5 years were sampled for two years (2022-2023). Metabarcoding analysis of soil bacteria (16S V4 rRNA) and fungi (ITS sub-region) were integrated with soil physiochemical properties and leaves´ physiological data. Pre-dawn leaf water potential and stomatal conductance confirmed the imposed drought scenarios. Even though, α- and β-diversity of prokaryotic and eukaryotic microbial communities differed more by season than water availability, samples clustered according to soil water content and pH (p<0.05). Fungal communities show higher differences in the structure across treatments than bacteria. In 2023, 16 bacterial against 61 fungal ASVs were significatively different in abundance between NI and FI. Beijerinckiaceae, Bradyrhizobiaceae (Alphaproteobacteria) and Nocardioidaceae, Streptomycetaceae (Actinobacteria) families resulted to be significatively more abundant in NI, while Ascomycota, Basidyomicota and Mortierellomycota are the most important fungal phyla in NI.  
With culturomics data, this study aims to gather insights into how soil microbiome is remodelled under drought and contribute to select bacterial and fungal taxa with potential to mitigate drought stress in vineyards.

DOI:

Publication date: June 13, 2024

Issue: Open GPB 2024

Type: Article

Authors

Gianmaria Califano1,2*, Júlio Lucena Maciel1Olfa Zarrouk3,4, Miguel Damásio5, Jose Silvestre5, Ana Margarida Fortes1,2

1Faculdade de Ciências, University of Lisbon, Portugal
2BioISI, Faculdade de Ciências, University of Lisbon, Portugal
3LEAF – Linking Landscape, Environment, Agriculture and Food Research Centre, Associate Laboratory TERRA, ISA-ULisboa, Lisboa, Portugal
4IRTA, Torre Marimon, Barcelona, Spain;
5INIAV, Polo de Dois Portos, Portugal

Contact the author*

Keywords

Soil Microbiome, Grapevine, Syrah, Drought, Crop Sustainability

Tags

IVES Conference Series | Open GPB | Open GPB 2024

Citation

Related articles…

PROGRESS OF STUDIES OF LEES ORIGINATING FROM THE FIRST ALCOHOLIC FERMENTATION OF CHAMPAGNE WINES

Champagne wines are produced via a two-step process: the first is an initial alcoholic fermentation of grape must that produces a still base wine, followed by a second fermentation in bottle – the prise de mousse – that produces the effervescence. This appellation produces non-vintage sparkling wines composed of still base wines assembled from different vintages, varieties, and regions. These base wines, or “reserve wines,” are typically conserved on their fine lies and used to compensate for quality variance between vintages (1). Continuously blending small amounts of these reserve wines into newer ones also facilitates preserving the producer’s “house style.”

Influence des facteurs naturels du terroir sur la maturation du raisin en Alsace

A study of the influence of environmental factors on the ripening of grapes under the conditions of Alsace is carried out. Emphasis is placed on the analysis of the mesoclimate and pedoclimate. The experiment is conducted on a network of plots of gewurztraminer grafted on SO4. The production conditions are standardized throughout the device.

Enhancing hydric stress tolerance by editing the VviMYB60 promoter with CRISPR/Cas9 

Climate change presents increasing challenges to viticulture, particularly with rising water stress contributing significantly to yield losses and damages. The identification of the MYB60 transcription factor, which regulates stomatal opening and closing in Arabidopsis thaliana and Vitis vinifera, offers potential solutions. Notably, knockout studies in Arabidopsis have shown reduced stomatal opening and increased drought tolerance in myb60 mutants. Additionally, the grapevine ortholog, VviMYB60, can restore the wild-type phenotype of Arabidopsis myb60 mutants. Further investigation of the Arabidopsis promoter region has revealed that mutations in DOF motifs lead to reduced expression of AtMYB60.

Grape ripening timing as a base for viticultural zoning: an agro-ecological approach

Due to the central role of the ripening timing in the evaluation of the varietal response to the environmental resources, a method to manage maturation curves has been developed. The method produces an index of veraison precocity and overcomes several methodological problems, like the visual evaluation of the veraison point and the multi-annual and multi-varieties data processing. It is based on a statistical and mathematical processing of the sugar ripening curves.

Barbera d’Asti: the characterization of the vineyard sites

[English version below]

L’objectif de l’étude est de mettre en évidence les différences rencontrées entre les vins Barbera d’Asti, qui sont produits en AOC. Celles-ci sont imputées aux terroirs caractérisés selon les facteurs pédologiques, climatiques, et qui conduisent à des différents potentiels viticoles et œnologiques. Il est proposé une individualisation des sous-zones.