The adaptation and resilience of scions and rootstocks to water constraint

We depict the main features of five viticulture agroclimatic indices for 626 wine growing regions within 41 countries.

Climate change impacts crop plants, plant pathogens, and their insect vectors and hence adds abiotic stress to the triangle of plant-virus-vector interactions.

Vitis champinii cultivars Ramsey and Dog-ridge are main choices for rootstocks to adapt viticulture in semi-arid and arid regions thanks to their distinctive tolerance to drought and salinity. However, genetic studies on non-vinifera rootstocks have heavily relied on the grapevine (Vitis vinifera) reference genome, which difficulted the assessment of the genetic variation between rootstock species and grapevines. In the present study, this limitation is addressed by introducing a novo phased genome assembly and annotation of Vitis champinii. This new Vitis champinii genome was employed as reference for mapping RNA-seq reads from the same species under drought and salt stresses, and for comparison the same reads were also mapped to the Vitis vinifera PN40024.V4 reference genome. A significant increase in alignment rate was gained when mapping Vitis champinii RNA-seq reads to its own genome, compared to the Vitis vinifera PN40024.V4 reference genome, thus revealing the expression levels of genes specific to Vitis champinii. Moreover, differences in coding sequences were observed in ortholog genes between Vitis champinii and Vitis vinifera, which therefore challenges previous differential expression analyses performed between contrasting Vitis genotypes on the same gene from the Vitis vinifera genome. Genes with possible implications in drought and salt tolerance have been identified across the genome of Vitis champinii, and the same genomic data can potentially guide the discovery of candidate genes specific from Vitis champinii for other traits of interest, therefore becoming a valuable resource for rootstock breeding designs, specially towards increased drought and salinity due to climate change.

Random sampling is often considered to be the best protocol for fruit sampling because it is assumed to produce a sample that best represents the vineyard population.

Le terroir viticole, qui est la base de la délimitation des aires d’Appellation d’Origine Contrôlée, est une notion complexe dans laquelle sont en interaction la vigne, les facteurs naturels tels que le sol, le climat, ainsi que le facteur humain à travers les pratiques des viticulteurs. Le terroir conditionne la composition des raisins et ainsi la qualité et la typicité des vins qui en sont issus.