terclim by ICS banner
IVES 9 IVES Conference Series 9 Integrated approaches for the functional characterization of miRNAs in grapevine

Integrated approaches for the functional characterization of miRNAs in grapevine

Abstract

Micro(mi)RNAs are small non-coding RNAs that regulate several pathways and are widely recognised as key players in plant development, tissue differentiation, and many other important physiological processes, including plant adaptation to biotic and abiotic stresses. The release of plant genomes and the application of high throughput sequencing have considerably extended miRNA discovery across many species, including grapevine (Vitis spp.). Despite their relevance in plant development, functional studies in grapevine to clarify the function of miRNAs are not yet available. Through the grapevine genetic improvement platform IMPROVIT at CNR-IPSP (http://www.ipsp.cnr.it/en/thematics/turin-headquarter-thematics/improvit/), we developed integrated approaches to discover miRNA function in grapevine. Transgenic plants were generated by either overexpressing or silencing vvi-miR393, a miRNA conserved in different plant species, and vvi_miC137, a grapevine-specific miRNA whose function is unknown despite being transcriptionally regulated in response to biotic and abiotic stresses. A total of 212 transgenic grapevines from two V. vinifera cultivars (Chardonnay and Bragat rosa) and the 110R rootstock were characterized. Molecular analyses showed that overexpressing lines increased the expression of the selected miRNAs up to 10-fold, whereas silencing by short tandem target mimic (STTM) approach reduced the expression of mature miRNAs by 70%. Five independed transgenic lines for each genotype and construct were acclimatised in greenhouse. Additionally, vvi_miC137 lines were ecophysiologically characterized under well-watered and drought conditions. Preliminary results showed that vvi_miC137 influenced plant development and leaf gas exchanges, its partial silencing improved grapevine growth performance. This miRNA could represent a new potential target for genetic improvement by gene editing.

DOI:

Publication date: June 13, 2024

Issue: Open GPB 2024

Type: Article

Authors

Chiara Pagliarani1, Amedeo Moine1, Anastasiia Kasianova1,2, Paolo Boccacci1, Luca Nerva3, Andrea Delliri1, Claudio Lovisolo2, Walter Chitarra3, Irene Perrone1, Giorgio Gambino1*

1 Institute for Sustainable Plant Protection, National Research Council (IPSP-CNR), Strada delle Cacce 73, 10135 Torino (Italy)
2 Department of Agricultural, Forest and Food Sciences (DISAFA), University of Torino, Largo Paolo Braccini 2, 10095 Grugliasco (TO), Italy
3 Research Centre for Viticulture and Enology, Council for Agricultural Research and Economics (CREA-VE), Via XXVIII Aprile 26, 31015 Conegliano (Italy)

Contact the author*

Keywords

miRNAs, genetic transformation, functional studies, grapevine development, water stress

Tags

IVES Conference Series | Open GPB | Open GPB 2024

Citation

Related articles…

Performance of Selected Uruguayan Native Yeasts for Tannat Wine Production at Pilot Scale

The wine industry is increasing the demand for indigenous yeasts adapted to the terroir to produce unique wines that reflect the distinctive characteristics of each region. In our group, we have identified and characterized 60 native yeast strains isolated from a vineyard in Maldonado-Uruguay, in which three strains stood out: Saccharomyces cerevisiae T193FS, Saturnispora diversa T191FS, and Starmerella bacillaris T193MS. Their oenological potential was evaluated at a semi-pilot scale in Tannat must vinification in the wine cellar to have a more precise and representative evaluation of the final product.

Addition of Malvasia di Candia Aromatica must and marcs to Golden Ale beer wort to obtain different Italian Grape Ales

Nowadays, the recovery of secondary resources of wine industry is insufficient and the developing of new products and adjuvants from secondary raw materials could become a relevant sector of research. The re-use of byproducts derived from winemaking could improve the sustainability of wine industry and give additional value to other food industries

Study of the colour and phenolic evolution of three different tannin/anthocyanin ratios over time in a model wine

Phenolic compounds are important quality indicators in red wine. A large number of polyphenols play an important role in wine development, contributing to the colour and the sensory perception of the wines. Anthocyanins are the pigments responsible for the colour in young red wines while tannins are the principal contributors to the bitterness and the astringency of the wines. Wine polyphenols are considered more complex molecules than grape phenolics, due to the enormous number of chemical reactions which take place during the entire winemaking process and storage, forming more stable compounds.

The impact of cell wall composition of the extraction of anthocyanins and tannins from grape berries

Extraction of anthocyanins and tannins have been studied for two grape varieties, Carignan and Grenache, two maturation levels and two vintages, in model solutions and in wines, using UHPLC-MS/MS in the MRM mode  and HPSEC.

Vine plant material: situation and prospect

vine plant material is one of the major factors of terroir. The vine numbers over 1,000 species, of which the main cultivated species, Vitis vinifera, includes some 6,000 varieties. For the last forty years, selection has been carried out on these, mainly through clonal selection. However, today, only 300 varieties present one or more clones. A dozen varieties are considered as international. The extreme requirements of selection, in terms of diseases, provoke the elimination of the majority of selected plants. This approach to selection is not thorough because it focuses mainly on elimination of virosis and phytoplasma diseases.