terclim by ICS banner
IVES 9 IVES Conference Series 9 Integrated approaches for the functional characterization of miRNAs in grapevine

Integrated approaches for the functional characterization of miRNAs in grapevine

Abstract

Micro(mi)RNAs are small non-coding RNAs that regulate several pathways and are widely recognised as key players in plant development, tissue differentiation, and many other important physiological processes, including plant adaptation to biotic and abiotic stresses. The release of plant genomes and the application of high throughput sequencing have considerably extended miRNA discovery across many species, including grapevine (Vitis spp.). Despite their relevance in plant development, functional studies in grapevine to clarify the function of miRNAs are not yet available. Through the grapevine genetic improvement platform IMPROVIT at CNR-IPSP (http://www.ipsp.cnr.it/en/thematics/turin-headquarter-thematics/improvit/), we developed integrated approaches to discover miRNA function in grapevine. Transgenic plants were generated by either overexpressing or silencing vvi-miR393, a miRNA conserved in different plant species, and vvi_miC137, a grapevine-specific miRNA whose function is unknown despite being transcriptionally regulated in response to biotic and abiotic stresses. A total of 212 transgenic grapevines from two V. vinifera cultivars (Chardonnay and Bragat rosa) and the 110R rootstock were characterized. Molecular analyses showed that overexpressing lines increased the expression of the selected miRNAs up to 10-fold, whereas silencing by short tandem target mimic (STTM) approach reduced the expression of mature miRNAs by 70%. Five independed transgenic lines for each genotype and construct were acclimatised in greenhouse. Additionally, vvi_miC137 lines were ecophysiologically characterized under well-watered and drought conditions. Preliminary results showed that vvi_miC137 influenced plant development and leaf gas exchanges, its partial silencing improved grapevine growth performance. This miRNA could represent a new potential target for genetic improvement by gene editing.

DOI:

Publication date: June 13, 2024

Issue: Open GPB 2024

Type: Article

Authors

Chiara Pagliarani1, Amedeo Moine1, Anastasiia Kasianova1,2, Paolo Boccacci1, Luca Nerva3, Andrea Delliri1, Claudio Lovisolo2, Walter Chitarra3, Irene Perrone1, Giorgio Gambino1*

1 Institute for Sustainable Plant Protection, National Research Council (IPSP-CNR), Strada delle Cacce 73, 10135 Torino (Italy)
2 Department of Agricultural, Forest and Food Sciences (DISAFA), University of Torino, Largo Paolo Braccini 2, 10095 Grugliasco (TO), Italy
3 Research Centre for Viticulture and Enology, Council for Agricultural Research and Economics (CREA-VE), Via XXVIII Aprile 26, 31015 Conegliano (Italy)

Contact the author*

Keywords

miRNAs, genetic transformation, functional studies, grapevine development, water stress

Tags

IVES Conference Series | Open GPB | Open GPB 2024

Citation

Related articles…

The role of tomato juice serum in malolactic fermentation in wine

Introduction: Malolactic fermentation (MLF) is a common process in winemaking to reduce wine acidity, maintain microbial stability and modify wine aroma. However, successful MLF is often hampered by their sluggish or stuck activity of malolactic bacteria (MLB) which may be caused by nutrient deficiency, especially when MLB are inoculated after alcoholic fermentation (Alexandre et al., 2004; Lerm et al., 2010). Identification and characterization of essential nutrients and growth factors for MLB allows for production of highly efficient nutrient supplements for MLF.

Study of grape plant behaviour (cv. Chasselas) on various “terroirs” of the Vaud county (Switzerland)

L’étude du comportement physiologique et agronomique de la vigne (cv. Chasselas) a été réalisée en 2001 par la Station fédérale de recherches en production végétale de Changins sur divers terroirs viticoles vaudois (Suisse), dans le cadre d’un projet d’étude des terroirs viticoles vaudois en collaboration avec le bureau I LETESSIER (SIGALES) à Grenoble et l’École polytechnique fédérale de Lausanne (EPFL).

OTR determination of aged closures: Impact on aroma compounds composition of Sauvignon blanc wines

Oxygen transfer rate (OTR) is a technical property of closure, and it modulates the oxygen supply to the wine during its bottle aging. It’s an important parameter to take into account in the analysis of wine aroma evolution. OTR distribution is well documented for new closures, but little research has been published on its determination for aged closures. Initial oxygen release after bottling impacts the composition of wines during the first years of storage), but the link between OTR, sensory perception and aroma composition after many years of aging has not yet been clearly studied. 

Valorisation agroviticole de l’effet terroir par l’enherbement des sols

The studies developed by INRA and UV, in Angers, concern wine-growing areas and their optimized management, both from an agro-viticultural and oenological point of view. Previous work (Morlat, 1989) made it possible to give a scientific dimension to the concept of viticultural terroir and demonstrated the considerable influence of this production factor on the quality and typicity of wines (Asselin et al, 1992 ) . A methodology for the integrated characterization of terroirs, based on the “Basic Terroir Natural Unit” (considered as the smallest spatial unit of territory usable in practice, and in which the response of the vine is homogeneous), has been development (Riou et al , 1995).

Influence of viticulture on the temporary evolution of the landscape: the case of the AO Ribera del Duero (Central Spain)

The European Landscape Convention (ELC, 2001) defined the landscape as the “part of a
territory as perceived by the population and resulting from the action of natural and/or human factors and their interrelationships”. Wine landscapes, protected or not under figures such as cultural landscapes or Cultural heritage, are a clear demonstration of this definition, denoting the interrelationships of the natural
environment and the action of the human, which modulates the territory to give the different wine
landscapes. This work was focused on the study of the effect of the human factors linked to the cultivation of the vine on the modification of the landscape.