terclim by ICS banner
IVES 9 IVES Conference Series 9 Identifying physiological and genetic bases of grapevine adaptation to climate change with maintained quality: Genome diversity as a driver for phenotypic plasticity  (‘PlastiVigne’ project)

Identifying physiological and genetic bases of grapevine adaptation to climate change with maintained quality: Genome diversity as a driver for phenotypic plasticity  (‘PlastiVigne’ project)

Abstract

In the face of climate change, new grapevine varieties will have to show an adaptive  phenotypic plasticity to maintain production with erratic water resources, and still ensure the quality of the final product. Their selection requires a better knowledge of the genetic basis of those traits and of the elementary processes involved in their variability. ‘PlastiVigne’, an emblematic project of the Vinid’Occ key challenge, funded by the Occitanie Region (France), tackles this issue with innovative genomic and physiological tools implemented on a unique panel of grape genetic resources representing the genetic diversity of Vitis vinifera. A graph-pangenome is developed from a representative set of high-quality genomes to study the extent and impact of structural genome variations and chromosomal rearrangements in the rapid adaptation capacity of grapevine. We will characterize structural variants potentially related to differential expression or alternative spicing of candidate genes for stress tolerance in individual grape berries. Markers derived from structural variants mapped on the pangenome, as well as new sets of SNP markers, will allow the identification of genomic regions associated to leaf water and carbon balance under several water stress regimes, its  plasticity, adaptation traits like phenology, genomic vulnerability, and to some traits related to the aromatic potential of grape berries. They represent new tools for grape breeding. More detailed functional analysis of leaf and berry phenotypic plasticity in response to water deficit will be then conducted, on a subset of contrasted varieties. We will present the project strategy and highlight a few preliminary results.

DOI:

Publication date: June 13, 2024

Issue: Open GPB 2024

Type: Poster

Authors

Dominique This 1, Roberto Bacilieri1, Eva Coindre1,4, Olivia di Valentin2, Baptiste Pierre1, Flora Tavernier1, Thomas Baerenzung dit Baron 3, Gautier Sarah1, Vincent Segura 1, Agnès Doligez1, Charles Romieu1, Thierry Lacombe1, Sylvain Santoni1, Christine Tollon-Cordet1, Audrey Weber1, Aude Coupel-Ledru 4, Thierry Simonneau4, Benoit Pallas4, Gaelle Rolland4, Stéphane Berthezène4, Romain Boulord4, Julien Pirrello2, Farid Regad2, Olivier Geffroy 3, Olivier Rodrigues3, Aurélie Roland5, Somaya Sachot5, Nicolas Saurin6, Emmanuelle Garcia-Adrados6, Cécile Marchal7, Sandrine Dedet7, Anne Mocoeur7, Alban Jacques3, Patrice This1*

1 AGAP Institute, Univ Montpellier – CIRAD – INRAE, Institut Agro, F-34398 Montpellier, France
2 LRSV,  Université de Toulouse – INP – Purpan, 31076 Toulouse, France
3 PPGV, Université de Toulouse -, INP – Purpan, 31076 Toulouse, France
4 LEPSE, Univ Montpellier – INRAE – Institut Agro, Montpellier, France
5 SPO, INRAE – Institut Agro -University Montpellier, 34060 Montpellier, France
6 Domaine de Pech Rouge, Univ Montpellier – INRAE, F-11430 Gruissan, France
7 Domaine de Vassal, INRAe, route de Sète, 34340 Marseillan, France

Contact the author*

Keywords

Vitis vinifera, plasticity, pangenome, water/carbon balance, aroma

Tags

IVES Conference Series | Open GPB | Open GPB 2024

Citation

Related articles…

Leaf necrosis induced by the insecticide carbaryl in Vitis rupestris ‘B38’

Carbaryl is an acetylcholine esterase inhibitor-type insecticide used for pest control on grapevine. We repeatedly observed the occurrence of interveinal leaf necrosis following carbaryl spray application in a Vitis rupestris x Vitis riparia F1 hybrid progeny vineyard. Spray applications induced necrosis in this progeny under both Missouri and New York field conditions an approximate one-to-one sensitive-to-insensitive segregation ratio and with 42% concordance. Results of subsequent in vitro experiments established causality between carbaryl treatment and leaf necrosis and confirmed the pattern of segregation observed in the field. We consistently map this phenotype to a major QTL on chromosome 16 of the female parent V. rupestris ‘B38’ regardless of whether we used field or in vitro-generated phenotype data.

Discriminant value of soil properties for terroir zoning

Environmental analysis (climate, vegetation, geomorfoloy-lanscape, lithology and soil) and its integration in a quality index taking the Appellation of Origin as the sole universe are used as general methodology for terroir zoning in Spain (Sotés and Gómez-Miguel, 1986-2005). This methodology is also applied to specific aspects of different Spanish Appellations of Origin (size, distribution and landscape peculiarities and vine occupation index).

Estudio de la adaptación y del comportamiento productivo y enológico de variedades blancas foráneas en la zona vitícola del Penedés

Estudio comparativo del comportamiento de ocho variedades de viníferas blancas en el Penedés, injertadas sobre los portainjertos 41-B y 110-R.
Se describen los comportamientos

Adsorption capacity of phenolics compounds by polyaniline materials in model solution

The aim of this work was to study the trapping capacity of four polyaniline polymers towards phenolic compounds in wine-like model solutions. METHODS: The model wine solution was composed of 12% (v/v) and 4 g/L of tartaric acid adjusted to pH = 3.6. A series of centrifuge tubes (15 mL) were filled with 10 mL of model solution enriched with 50 mg/L of five phenolic compounds (i.e., Gallic acid, caffeic acid, (+)-catechin, (-)-epicatechin, and rutin), and treated with different doses of PANI polymer (i.e., 0, 2, 4 and 8 g/L). After the addition of the polymer, the samples were stirred using a platform shaker at room temperature (20 ºC) for 2, 8, 16 and 24 h. All treatments included three replications.

The “green gold” @fem: assessing grapevine germplasm diversity to crossbreed the varieties of the future

Context and purpose of the study. To date over 3,000 grapevine accessions have been collected at Fondazione Edmund Mach (FEM).