terclim by ICS banner
IVES 9 IVES Conference Series 9 Identifying physiological and genetic bases of grapevine adaptation to climate change with maintained quality: Genome diversity as a driver for phenotypic plasticity  (‘PlastiVigne’ project)

Identifying physiological and genetic bases of grapevine adaptation to climate change with maintained quality: Genome diversity as a driver for phenotypic plasticity  (‘PlastiVigne’ project)

Abstract

In the face of climate change, new grapevine varieties will have to show an adaptive  phenotypic plasticity to maintain production with erratic water resources, and still ensure the quality of the final product. Their selection requires a better knowledge of the genetic basis of those traits and of the elementary processes involved in their variability. ‘PlastiVigne’, an emblematic project of the Vinid’Occ key challenge, funded by the Occitanie Region (France), tackles this issue with innovative genomic and physiological tools implemented on a unique panel of grape genetic resources representing the genetic diversity of Vitis vinifera. A graph-pangenome is developed from a representative set of high-quality genomes to study the extent and impact of structural genome variations and chromosomal rearrangements in the rapid adaptation capacity of grapevine. We will characterize structural variants potentially related to differential expression or alternative spicing of candidate genes for stress tolerance in individual grape berries. Markers derived from structural variants mapped on the pangenome, as well as new sets of SNP markers, will allow the identification of genomic regions associated to leaf water and carbon balance under several water stress regimes, its  plasticity, adaptation traits like phenology, genomic vulnerability, and to some traits related to the aromatic potential of grape berries. They represent new tools for grape breeding. More detailed functional analysis of leaf and berry phenotypic plasticity in response to water deficit will be then conducted, on a subset of contrasted varieties. We will present the project strategy and highlight a few preliminary results.

DOI:

Publication date: June 13, 2024

Issue: Open GPB 2024

Type: Poster

Authors

Dominique This 1, Roberto Bacilieri1, Eva Coindre1,4, Olivia di Valentin2, Baptiste Pierre1, Flora Tavernier1, Thomas Baerenzung dit Baron 3, Gautier Sarah1, Vincent Segura 1, Agnès Doligez1, Charles Romieu1, Thierry Lacombe1, Sylvain Santoni1, Christine Tollon-Cordet1, Audrey Weber1, Aude Coupel-Ledru 4, Thierry Simonneau4, Benoit Pallas4, Gaelle Rolland4, Stéphane Berthezène4, Romain Boulord4, Julien Pirrello2, Farid Regad2, Olivier Geffroy 3, Olivier Rodrigues3, Aurélie Roland5, Somaya Sachot5, Nicolas Saurin6, Emmanuelle Garcia-Adrados6, Cécile Marchal7, Sandrine Dedet7, Anne Mocoeur7, Alban Jacques3, Patrice This1*

1 AGAP Institute, Univ Montpellier – CIRAD – INRAE, Institut Agro, F-34398 Montpellier, France
2 LRSV,  Université de Toulouse – INP – Purpan, 31076 Toulouse, France
3 PPGV, Université de Toulouse -, INP – Purpan, 31076 Toulouse, France
4 LEPSE, Univ Montpellier – INRAE – Institut Agro, Montpellier, France
5 SPO, INRAE – Institut Agro -University Montpellier, 34060 Montpellier, France
6 Domaine de Pech Rouge, Univ Montpellier – INRAE, F-11430 Gruissan, France
7 Domaine de Vassal, INRAe, route de Sète, 34340 Marseillan, France

Contact the author*

Keywords

Vitis vinifera, plasticity, pangenome, water/carbon balance, aroma

Tags

IVES Conference Series | Open GPB | Open GPB 2024

Citation

Related articles…

Coming of age: do old vines actually produce berries with higher enological potential than young vines? A case study on the Riesling cultivar

Consumers and the wine industry tend to agree on the ability of old vines to produce fruit that allows the production of wine of superior character. However, despite past and ongoing research, objective evidence of this point of view is still debated and studies on robust, specifically dedicated plots are scarce. Thus the impact of grapevine age on berry oenological potential and wine quality remains an open question. To try to objectively address the issue, a unique vineyard was established at Geisenheim University, Germany. It was planted in 1971 with cv. Riesling grafted on 5C Teleki. In 1995 and 2012, several rows were uprooted and replanted with the same rootstock/scion combination, resulting in a vineyard with alternate rows of identical plant material, but with different planting dates. The parameters of technical maturity and grape composition at harvest were analyzed during seasons 2014, 2015, 2016 and 2017 combining HPLC and enzymatic methods. Separate micro-vinifications were made for each age group and wine composition was analyzed by a combination of 1H-NMR and SPE-GC-MS.

Survey of winegrape irrigation practices in the Sacramento-San Joaquin Valley of California

In California vineyards, irrigation is considered as one of the most important decisions growers will make. Recent research has revealed that decisions of when to begin irrigation and how much water to apply have considerable consequences for final grape quality and hence wine quality. However, it is unclear whether and to what extent the average winegrape grower uses objective data to begin irrigating or to determine the amount of water to apply.

Training system and its influence on iso-anisohydric behavior of cv. Syrah

Water use efficiency is one of the most valued objectives in vine growing in mediterranean climates (de la fuente et al., 2015). Due to this, the grape growers provide different adaptation strategies according to their efficient consumption against the presumable water deficit generated under these environmental conditions. The use of non-positioned shoot systems (like sprawl, bush, etc.) Can help to achieve this objective.

In line monitoring of red wine fermentations using ir spectrospcopy

There has been a shift in modern industry to implement non-destructive and non-invasive process monitoring techniques (Helmdach et al., 2013).

Characterization of the adaptive mechanisms of grapevine rootstocks to iron deficiency induced by lime stress

Iron (Fe) deficiency is one of the important nutritional disorders for grapevine growing in alkaline and calcareous soils. Although Fe is an abundant element in soil, several factors limiting its availability, particularly the high levels of calcium carbonate or bicarbonate in soil, leading to a remarkable reduction in grapevine growth and productivity. The use of Fe chlorosis-tolerant rootstocks seems to be a cost-effective and efficient way to maintain Fe balance. Morphological and physiological changes occur in plants to cope with low Fe availability, including enhancement of ferric chelate reductase activity and altering root system by increasing lateral roots and root hairs.