terclim by ICS banner
IVES 9 IVES Conference Series 9 Identifying physiological and genetic bases of grapevine adaptation to climate change with maintained quality: Genome diversity as a driver for phenotypic plasticity  (‘PlastiVigne’ project)

Identifying physiological and genetic bases of grapevine adaptation to climate change with maintained quality: Genome diversity as a driver for phenotypic plasticity  (‘PlastiVigne’ project)

Abstract

In the face of climate change, new grapevine varieties will have to show an adaptive  phenotypic plasticity to maintain production with erratic water resources, and still ensure the quality of the final product. Their selection requires a better knowledge of the genetic basis of those traits and of the elementary processes involved in their variability. ‘PlastiVigne’, an emblematic project of the Vinid’Occ key challenge, funded by the Occitanie Region (France), tackles this issue with innovative genomic and physiological tools implemented on a unique panel of grape genetic resources representing the genetic diversity of Vitis vinifera. A graph-pangenome is developed from a representative set of high-quality genomes to study the extent and impact of structural genome variations and chromosomal rearrangements in the rapid adaptation capacity of grapevine. We will characterize structural variants potentially related to differential expression or alternative spicing of candidate genes for stress tolerance in individual grape berries. Markers derived from structural variants mapped on the pangenome, as well as new sets of SNP markers, will allow the identification of genomic regions associated to leaf water and carbon balance under several water stress regimes, its  plasticity, adaptation traits like phenology, genomic vulnerability, and to some traits related to the aromatic potential of grape berries. They represent new tools for grape breeding. More detailed functional analysis of leaf and berry phenotypic plasticity in response to water deficit will be then conducted, on a subset of contrasted varieties. We will present the project strategy and highlight a few preliminary results.

DOI:

Publication date: June 13, 2024

Issue: Open GPB 2024

Type: Poster

Authors

Dominique This 1, Roberto Bacilieri1, Eva Coindre1,4, Olivia di Valentin2, Baptiste Pierre1, Flora Tavernier1, Thomas Baerenzung dit Baron 3, Gautier Sarah1, Vincent Segura 1, Agnès Doligez1, Charles Romieu1, Thierry Lacombe1, Sylvain Santoni1, Christine Tollon-Cordet1, Audrey Weber1, Aude Coupel-Ledru 4, Thierry Simonneau4, Benoit Pallas4, Gaelle Rolland4, Stéphane Berthezène4, Romain Boulord4, Julien Pirrello2, Farid Regad2, Olivier Geffroy 3, Olivier Rodrigues3, Aurélie Roland5, Somaya Sachot5, Nicolas Saurin6, Emmanuelle Garcia-Adrados6, Cécile Marchal7, Sandrine Dedet7, Anne Mocoeur7, Alban Jacques3, Patrice This1*

1 AGAP Institute, Univ Montpellier – CIRAD – INRAE, Institut Agro, F-34398 Montpellier, France
2 LRSV,  Université de Toulouse – INP – Purpan, 31076 Toulouse, France
3 PPGV, Université de Toulouse -, INP – Purpan, 31076 Toulouse, France
4 LEPSE, Univ Montpellier – INRAE – Institut Agro, Montpellier, France
5 SPO, INRAE – Institut Agro -University Montpellier, 34060 Montpellier, France
6 Domaine de Pech Rouge, Univ Montpellier – INRAE, F-11430 Gruissan, France
7 Domaine de Vassal, INRAe, route de Sète, 34340 Marseillan, France

Contact the author*

Keywords

Vitis vinifera, plasticity, pangenome, water/carbon balance, aroma

Tags

IVES Conference Series | Open GPB | Open GPB 2024

Citation

Related articles…

A sundial vineyard: impact of row density and orientation on cv. Cabernet-Sauvignon physiology and grape composition, insights to face a climate change scenario

An experimental vineyard with a radial array was planted in 2018, to provide valuable information on the relationship between orientation and planting density on plant physiology and cluster microclimate, and the consequent impacts on grape secondary metabolites, including aromas and polyphenols.

Coping with extreme climatic events: some lessons from recent work on grapevine under heat peak

Climate change critically challenges viticulture. Among other threats, extreme and increasingly frequent heatwaves cause irreversible burns on leaves and bunches. A series of observations and experiments was conducted to better understand how leaf burns originate and whether genetics or management practices can mitigate them. In 2019, a panel of 279 potted cultivars of Vitis vinifera L. grown outdoors suffered a heat peak and a genetic origin of leaf burn variability was demonstrated. To deeper explore this variability, fourteen cultivars were selected for their contrasting responses to high temperatures, and detached leaves were submitted to a controlled increase in temperature up to 50 °C in a growth chamber.

Withering of the ‘Moscato giallo’ grapes under covered space

For the purpose of producing predicate wines in northern part of Croatia, grapes are traditionally left on the vine unpicked. However, grapes on the vine are exposed to unfavorable environmental conditions that affect rapid rotting and attacked by birds. To eliminate the mentioned risks, the grapes can be picked and placed in a protected space (loft, greenhouse, etc.) suitable for drying. This study presents the results of research on withering grapes of the ‘Moscato giallo’ variety in two tretment: sun drying (under covered terrace) and drying in the shade (loft). The following quality parameters were monitored: mass of grapes, sugar concentration, content of total acids, pH, content of organic acids.

Biosurfactant from corn-milling industry improves the release of phenolic compounds during red winemaking

AIM: Biosurfactants can be used as emulsifier agents to improve the taste, flavour, and quality of food-products with minimal health hazards [1]. They are surface-active compounds with antioxidant and solubilizing properties [2].

Measurement of synthetic solutions imitating alcoholic fermentation by dielectric spectroscopy

Having the possibility to use a wide spectrum of elecromagnetic waves, dielectric spectroscopy is a technique commonly used for electrical characterization of dielectrics or that of materials with high energy storage capacity, just to name a few. Based on the electrical excitation of dipoles (polymer chains or molecules) or ions in relation to the characteristics of a weak external electric field, this method allows the measurement of the complex permittivity or impedance of polarizable materials, each component having a characteristic dipole moment.In recent years, the food industry has also benefited from the potential offered by this technique, whether for the evaluation of fruit quality or during the pasteurization of apple juice [1-3]. As the tests are fast and do not destroy the products, dielectric spectroscopy proved to be an experimental tool suitable for online measurements as well as long-term monitoring.