Terroir 2020 banner
IVES 9 IVES Conference Series 9 International Terroir Conferences 9 Terroir 2020 9 History and innovation of terroir 9 Within-vineyard variability in grape composition at the estate scale can be assessed through machine-learning modeling of plant water status in space and time. A case study from the hills of Adelaida District AVA, Paso Robles, CA, USA

Within-vineyard variability in grape composition at the estate scale can be assessed through machine-learning modeling of plant water status in space and time. A case study from the hills of Adelaida District AVA, Paso Robles, CA, USA

Abstract

Aim: Through machine-learning modelling of plant water status from environmental characteristics, this work aims to develop a model able to predict grape phenolic composition in space and time to guide selective harvest decisions at the estate scale.

Methods and Results: Work was conducted during two consecutive seasons in a ~40ha (100ac) premium wine estate located in the Adelaida District AVA of Paso Robles, CA, USA. The vineyard topography was very diverse, with a large variation in slope grade (0-30%) and exposure (0-359). One hundred experimental units were identified by a maximum dissimilarity sampling algorithm based on environmental attributes derived from a digital elevation model and a soil map. Reflecting the estate varietal distribution, ~70% were Cabernet-Sauvignon units, 20% Cabernet-Franc, and 10% Petit-Verdot units grafted on 1103P or 420A (~50-50%). Grapevine water status was monitored by weekly measurements of stem water potentials, Ψstem, and analysis of carbon isotope discrimination of grape musts, δ13C, at harvest. The grape composition during ripening was assessed by measuring total soluble solids, titratable acidity, and pH of musts and by a comprehensive assessment of skin phenolic composition with HPLC-DAD. Additional field measurements included shoot-count and yield assessment. Vegetation indexes were derived from canopy reflectance obtained from ~3m resolution CubeSat satellites. Irrigation amounts were provided by the grower, and weather data were obtained from three on-site stations. 

Grapevine Ψstem was modelled from weather data (temperature, relative humidity, rainfall), irrigation amounts, vegetation indexes, topographic attributes, soil type using a gradient-boosting-machine algorithm. The model was able to predict plant water status with <0.1 MPa of error (estimated as root mean squared error in a cross-validation procedure). Significant differences in water status were observed between rootstocks and main environmental drivers were slope grade and aspect (i.e. exposure). External validation of the model was carried out by correlating predictions with δ13C. The model allowed obtaining high-resolution daily mapping of Ψstem at the estate scale. Time-series of grapevine Ψstem were significantly correlated with the content of total soluble solids of musts, grape anthocyanin amounts, and the ratio of tri-hydroxylated to di-hydroxylated compounds at harvest and mapped. Spatial-clustering of grape anthocyanin composition was obtained from Ψstem model-estimates and used to guide harvest selectively. 

Conclusion: 

Grapevine water status confirmed to be an important driver in the variability of grape composition, even though the vineyard was irrigated. Variability in water status was related to environmental attributes (slope, aspect, incoming radiation) and the machine-learning approach proved to be useful to predict and understand plant-environment interactions and effects on grape composition in a varied and large dataset.

Significance and Impact of the Study: Vineyards are often located on slopes and accurate modelling of grapevine water status in hillslope conditions is a challenging task. This research demonstrates for the first time that it is possible to obtain daily estimates of grapevine water status at the estate scale by re-elaborating routine measurements with machine-learning technologies. This information can be used to drive selective harvest decisions and clustering within-vineyard variability at the estate scale to easily implement selective harvest decisions.

DOI:

Publication date: March 19, 2021

Issue: Terroir 2020

Type: Video

Authors

Luca Brillante

California State University Fresno, Fresno, United States

Contact the author

Keywords

Grapevine water status, machine learning, phenolic composition

Tags

IVES Conference Series | Terroir 2020

Citation

Related articles…

Local ancient grapevine cultivars to face future viticulture

Among the different strategies to cope with the negative impacts of climate change on viticulture, the exploitation of genetic diversity is one of the most promising to adapt to new conditions and maintain wine production and quality. One of the biggest concerns in the context of climate change is to improve water use efficiency (WUE). In this way, the use of genotypes that present a better response to drought and high WUE is a key issue. In this work, physiological performance analysis was conducted to compare the water deficit stress (WDS) responses of local and widespread grapevines cultivars. Leaf gas exchange, water use efficiency (WUE) at different levels (leaf and long-term WUE (∆13C)), leaf osmotic adjustment and other water relations parameters were determined in plants under well-watered and WDS conditions alongside assessment of the levels of foliar hormones concentrations. Results denote that local cultivars displayed better physiological performance under WDS as compared to the widely-distributed ones. he results corroborate the hypothesis that better stomatal control allows increasing leaf WUE under drought as occurred in the local Callet cv.; but the minority local cultivar Escursac cv. showed high WUE under both treatments. In this case, high WUE can be related to maintaining higher photosynthetic activity under drought. The different mechanisms underlying the better performance under WDS and high WUE of minority local cultivars are discussed.

Comparison of imputation methods in long and varied phenological series. Application to the Conegliano dataset, including observations from 1964 over 400 grape varieties

A large varietal collection including over 1700 varieties was maintained in Conegliano, ITA, since the 1950s. Phenological data on a subset of 400 grape varieties including wine grapes, table grapes, and raisins were acquired at bud break, flowering, veraison, and ripening since 1964. Despite the efforts in maintaining and acquiring data over such an extensive collection, the data set has varying degrees of missing cases depending on the variety and the year. This is ubiquitous in phenology datasets with significant size and length. In this work, we evaluated four state-of-the-art methods to estimate missing values in this phenological series: k-Nearest Neighbour (kNN), Multivariate Imputation by Chained Equations (mice), MissForest, and Bidirectional Recurrent Imputation for Time Series (BRITS). For each phenological stage, we evaluated the performance of the methods in two ways. 1) On the full dataset, we randomly hold-out 10% of the true values for use as a test set and repeated the process 1000 times (Monte Carlo cross-validation). 2) On a reduced and almost complete subset of varieties, we varied the percentage of missing values from 10% to 70% by random deletion. In all cases, we evaluated the performance on the original values using normalized root mean squared error. For the full dataset we also obtained performance statistics by variety and by year. MissForest provided average errors of 17% (3 days) at budbreak, 14% (4 days) at flowering, 14.5% (7 days) at veraison, and 17% (3 days) at maturity. We completed the imputations of the Conegliano dataset, one of the world’s most extensive and varied phenological time series and a steppingstone for future climate change studies in grapes. The dataset is now ready for further analysis, and a rigorous evaluation of imputation errors is included.

Geospatial trends of bioclimatic indexes in the topographically complex region of Barolo DOCG

Barolo DOCG is an economically important wine producing region in Northwest Italy. It is a small region of approximately 70 km2 gross area. The topography is very complex with steep sloped hills ranging in elevation from below 200 m to 550 m. Barolo DOCG wine is made exclusively from the Nebbiolo grape. Bioclimatic indexes are often used in viticulture to gain a better understanding of broader climate trends which can be compared temporally and geographically. These indexes are also used for identifying potential phenological timing, growing region suitability, and potential risks associated with expected climatic changes. Understanding how topography influences bioclimatic indexes can help with understanding of mesoscale climate behaviour leading to improved decision making and risk management strategies. The average monthly maximum and minimum temperatures, the Cool Night Index, the Huglin Index, and the monthly diurnal range (from July to October) were calculated using data from 45 weather stations within a 40 km radius of the Barolo DOCG growing area between the years 1996 and 2019. Linear and multiple regression models were developed using independent variables (elevation, aspect, slope) extracted from a digital elevation model to identify significant relationships. Bioclimatic indexes were then kriged with external drift using independent variables that showed significant relationships with the bioclimatic index using a 100 m resolution grid. The maximum monthly temperatures and the Huglin Index showed consistent significant negative relationships with elevation in all years. The minimum monthly temperatures showed no relationship with elevation but in some months a small but significant relationship was observed with aspect. Due to the lack of a relationship between minimum monthly temperatures and elevation compared to the significant relationship between maximum monthly temperatures and elevation, monthly diurnal range had a negative relationship with elevation.

Downscaling of remote sensing time series: thermal zone classification approach in Gironde region

In viticulture, the challenges of local climate modelling are multiple: taking into account the local environment, fine temporal and spatial scales, reliable time series of climate data, ease of implementation and reproducibility of the method. At the local scale, recent studies have demonstrated the contribution of spatialization methods for ground-based climate observation data considering topographic factors such as altitude, slope, aspect, and geographic coordinates (Le Roux et al, 2017; De Rességuier et al, 2020). However, these studies have shown questions in terms of the reproducibility and sustainability of this type of climate study. In this context, we evaluated the potential of MODIS thermal satellite images validated with ground-based climate data (Morin et al, 2020). Previous studies have been encouraging, but questions remain to be explored at the regional scale, particularly in the dynamics of the massive use of bioclimatic indices to classify the climate of wine regions. The results at the local scale were encouraging, but this approach was tested in the current study at the regional scale. Several objectives were set: 1) to evaluate the downscaling method for land surface temperature time series, 2) to identify regional thermal structure variations. We used weekly minimum and maximum surface temperature time series acquired by MODIS satellites at a spatial resolution of 1000 m and downscaled at 500 m using topographical variables. Two types of analyses were performed:

Inhibition of Oenococcus oeni during alcoholic fermentation by a selected Lactiplantibacillus plantarum strain

The use of selected cultures of the species Lactiplantibacillus plantarum in Oenology has grown in prominence in recent years. While initial applications of this species centred very much around malolactic fermentation (MLF), there is strong evidence to show that certain strains can be harnessed for their bio-protective effects. Unwanted spontaneous MLF during alcoholic fermentation (AF), driven by rogue Oenococcus oeni, is a winemaking deviation that is very difficult to manage when it occurs. This work set out to determine the efficacy of one particular strain of Lactiplantibacillus plantarum(Viniflora® NoVA™ Protect), against this problem in Cabernet Sauvignon must. The work was carried out at commercial scale and in a winery environment and compared the bio-protective culture with the more traditional approach of reducing must pH by the addition of tartaric acid. The combination of both was also investigated. The concentration of both Oenococcus oeni and Lactiplantibacillus plantarum was determined using qPCR. The adventitious Oenococcus oeni showed the most growth during AF in the control wine, whereas in the wines treated with Lactiplantibacillus plantarum a bacteriostatic effect against this species was observed. This effect was comparable to the wines treated with tartaric acid. This has particular commercial relevance for controlling the flora in musts with high pH, or when the addition of tartaric acid is either not permitted or is prohibitive for other reasons.