terclim by ICS banner
IVES 9 IVES Conference Series 9 International Congress on Grapevine and Wine Sciences 9 2ICGWS-2023 9 Advancing grapevine science through genomic research

Advancing grapevine science through genomic research

Abstract

The seminar will examine the complexities and prospects of genomic research on Vitis species, characterize by exceptionally high heterozygosity and common interspecific gene flow. The seminar will showcase case studies highlighting the critical role of diploid genome references in grape research, specifically in areas such as aroma development, disease resistance, and domestication traits. It will also address the emerging focus on pangenomes within the Vitis genus, particularly in the context of genetic studies on naturally interbreeding populations. This is crucial for understanding genes linked to both disease and environmental stress resistance. The seminar will present a super-pangenome of North American Vitis species, constructed from diploid chromosome-scale assemblies, and introduce innovative panGWAS methods for investigating abiotic stress resistance in wild grape populations.

Acknowledgements: This work is supported by the National Science Foundation grant #1741627, a Specialty Crop Research Initiative Competitive Grant, Award No. 2022-51181-38240, of the USDA National Institute of Food and Agriculture, the E&J Gallo Winery, and the Louis P. Martini Endowment.

DOI:

Publication date: October 19, 2023

Issue: ICGWS 2023

Type: Article

Authors

Dario Cantù

1Department of Viticulture and Enology, University of California, Davis

Contact the author*

Keywords

genome-enabled research, diploid genomes, chromosome-scale genome assembly, aroma genetics, domestication, flower sex determination, salt tolerance

Tags

2ICGWS | ICGWS | ICGWS 2023 | IVES Conference Series

Citation

Related articles…

Intelligent use of ethanol for the direct quantitative determination of volatile compounds in spirit drinks

The quality of any alcoholic beverage depends on many parameters, such as cultivars, harvesting time, fermentation, distillation technology used, quality and type of wooden barrels (in case of matured drinks), etc.; however, the most important factor in their classification is content of volatile compounds.

First insights on the intra-species diversity in V. berlandieri: environmental adaptation and agronomic performances when used as rootstock

In grafted plants, such as grapevine, increasing the diversity of rootstocks available to growers is an ideal strategy to get adaptation to climate change. The rootstocks used for grapevine are hybrids of various American Vitis, including V. berlandieri. The rootstocks currently used in vineyards are derived from breeding programs involving very small numbers of parental individuals.

Simulating the impact of climate change on grapevine behaviour and viticultural activities

Global climate change affects regional climates and hold implications for wine growing regions worldwide

Soil and topography effects on water status and must composition of chardonnay in burgundy & a mini meta‐analysis of the δ 13C/water potentials correlation

The measurement of carbon isotopic discrimination in grape sugars 13 at harvest (δ C) is an integrated assessment of water status during ripening.

Which potential for Near Infrared Spectroscopy to characterize rootstock effects on grapevines?

Developing rootstocks adapted to environmental constraints constitutes a key lever for grapevine adaptation to climate change. In this context, Near Infrared Spectroscopy (NIRS) could be used as a high-throughput phenotyping technique to simplify the study of rootstocks in grafted situations. This study is an exploratory analysis to evaluate the potential of NIRS acquired on grafted tissues to reveal rootstock effects as well as the plasticity of combinations of scion/rootstock to better characterize these interactions.
Through the study of 25 combinations (5 scions times 5 rootstocks) in a dedicated experimental vineyard, we showed that NIRS obtained from grafted tissues capture rootstock and scion/rootstock interaction signals, up to 20% of the total variance at specific wavelengths.