terclim by ICS banner
IVES 9 IVES Conference Series 9 International Congress on Grapevine and Wine Sciences 9 2ICGWS-2023 9 Effect of drought on grapevine wood fungal pathogen communities using a metatranscriptomics approach

Effect of drought on grapevine wood fungal pathogen communities using a metatranscriptomics approach

Abstract

Crops are facing increasing biotic and abiotic stress pressures due to global changes. However, trade-off mechanisms between these stresses and the underlying physiological processes are still poorly understood, especially in perennial crop species. To better understand these trade-offs, we studied the effect of drought on grapevine (Vitis vinifera) physiology and esca-related wood fungal communities. Esca is a vascular disease caused by a community of wood-infecting pathogenic fungi, and characterized by trunk necrosis, leaf scorch symptoms, yield losses, and mortality. This grapevine disease lead to xylem hydraulic failure and leaf symptoms are inhibited by severe drought. To characterize the molecular processes underlying the interactions between drought and esca, we conducted two experiments on 30-year-old Sauvignon blanc vines, expressing or not esca leaf symptoms, and subjected or not to drought stress under controlled conditions. Sapwood samples from the trunks were used to perform community-level transcriptomics analyses. Results will be also analyzed in the light of others metabolomics and ecophysiological data acquired on wood and leaf samples. Such an integrative approach will provide new insights into the understanding of grapevine/esca pathosystem under drought conditions, in terms of physiological and functional responses in either host and pathogens.

Acknowledgements: The authors thanks Université de Bordeaux for funding the GPR (Great Research Project) Bordeaux Plant Science.

DOI:

Publication date: October 6, 2023

Issue: ICGWS 2023

Type: Poster

Authors

Marie Chambard1,2, Ninon Dell’Acqua1, Giovanni Bortolami1, Dario Cantù3, Nathalie Ferrer1, Gregory A. Gambetta4, Marie Foulongne-Oriol2, Chloé E. L. Delmas1

1 INRAE Bordeaux Nouvelle Aquitaine, UMR 1065 SAVE, 71 avenue Edouard Bourlaux – CS 20032, 33882 Villenave d’Ornon cedex
2 INRAE Bordeaux Nouvelle Aquitaine, UR 1264 MycSA, 71 avenue Edouard Bourlaux – CS 20032, 33882 Villenave d’Ornon cedex

3 Department of Viticulture and Enology, University of California, Davis, One Shields Ave, Davis, CA 95618, USA
4 INRAE Bordeaux Nouvelle Aquitaine, UMR 1287 EGFV, 71 avenue Edouard Bourlaux – CS 20032, 33882 Villenave d’Ornon cedex

Contact the author*

Keywords

Vitis vinifera Sauvignon Blanc, esca disease, drought, metatranscriptomics, physiology

Tags

2ICGWS | ICGWS | ICGWS 2023 | IVES Conference Series

Citation

Related articles…

Effects of heat and water stress on grapevine health: primary and secondary metabolism

Grapevine resilience to climate change has become one of the most pressing topics in the Viticulture & Enology field. Vineyard health demands understanding the mechanisms that explain the direct and indirect interactions between environmental stressors. The current climate change scenario, where drought and heat-wave are more frequent and intense, strongly demands improving our knowledge of environmental stresses. During a heatwave, the ambient temperature rises above the plant’s average tolerance threshold and, generally, above 35 oC plant’s adaptation to heat stress is activated.

Exploring intra-vineyard variability with sensor- and molecular-based approaches 

The application of remote and proximal sensing is a fast and efficient method to monitor grapevine vegetative and physiological parameters and is considered valuable to derive information on associated yield and quality traits in the vineyard. Further details can be obtained by the application of molecular analysis at the gene expression level aiming at elucidating how pathways controlling the formation of different grape quality traits are influenced by spatial variability. This work aims at evaluating intra-vineyard variability in grape composition at harvest and at comparing this with remotely sensed canopy vegetation data and molecular-based approaches.

Adsorption of tetraconazole by organic residues and vineyard organically-amended soils 

Spain is the country with the largest wine-producing area in the EU and its productivity is largely controlled applying fungicides. However, residues of these compounds can move and contaminate surface and groundwater. The objective of this work was to evaluate the capacity of bioadsorbents from different origin to adsorb and immobilize tetraconazole by themselves or when applied as organic soil amendment, and to prevent soil and water contamination by this fungicide. The adsorption of tetraconazole by 3 organic residues: spent mushroom substrate (SMS), green compost (GC) and vine pruning sawdust (VP), as well as by vineyard soils unamended and amended individually with these residues at 1.5% (w/w) was evaluated using the batch equilibrium technique.

Water availability at budbreak time in vineyards that are deficitary irrigated during the summer: Effect on must volatile composition


In recent years, Mediterranean regions are being affected by marked climate changes, primarily characterized by reduced precipitation, greater concurrence of temperature extremes and drought during the growing season, and increased inter-annual variability in temperatures and rainfall. Generally, high-quality red wines need moderate water deficit. Hence, irrigation may be needed to avoid severe vine water stress occurring in some vintages and soils with low holding capacity. The aim of this work was to evaluate the effects of soil recharge irrigation in pre-sprouting and summer irrigation every week (30 % ETO) from the pea size state until the end of ripening (RP) compared to exclusively summer irrigation every week (R) in the same way that RP, on must volatile composition at harvest.

Lipids at the crossroads of protection: lipid signalling in grapevine defence mechanisms

Understanding grapevine molecular processes and the underlying defence responses is vital for developing sustainable disease control strategies. Lipid signalling pathways, involving the synthesis and degradation of lipid molecules, have emerged as a key regulator in plant defence against pathogens. This study aims to elucidate the role of fatty acids and lipid signalling in grapevine’s defence response to P. viticola infection. The expression of lipid metabolism-related as well as lipid signalling genes was analysed, by qPCR, in three grapevine genotypes: Chardonnay (susceptible), Regent (tolerant) with Rpv3-1 resistance loci, and Sauvignac (resistant) harbouring a pyramid of Rpv12 and Rpv3-1 resistance loci.