terclim by ICS banner
IVES 9 IVES Conference Series 9 International Congress on Grapevine and Wine Sciences 9 2ICGWS-2023 9 Advancing grapevine science through genomic research

Advancing grapevine science through genomic research

Abstract

The seminar will examine the complexities and prospects of genomic research on Vitis species, characterize by exceptionally high heterozygosity and common interspecific gene flow. The seminar will showcase case studies highlighting the critical role of diploid genome references in grape research, specifically in areas such as aroma development, disease resistance, and domestication traits. It will also address the emerging focus on pangenomes within the Vitis genus, particularly in the context of genetic studies on naturally interbreeding populations. This is crucial for understanding genes linked to both disease and environmental stress resistance. The seminar will present a super-pangenome of North American Vitis species, constructed from diploid chromosome-scale assemblies, and introduce innovative panGWAS methods for investigating abiotic stress resistance in wild grape populations.

Acknowledgements: This work is supported by the National Science Foundation grant #1741627, a Specialty Crop Research Initiative Competitive Grant, Award No. 2022-51181-38240, of the USDA National Institute of Food and Agriculture, the E&J Gallo Winery, and the Louis P. Martini Endowment.

DOI:

Publication date: October 19, 2023

Issue: ICGWS 2023

Type: Article

Authors

Dario Cantù

1Department of Viticulture and Enology, University of California, Davis

Contact the author*

Keywords

genome-enabled research, diploid genomes, chromosome-scale genome assembly, aroma genetics, domestication, flower sex determination, salt tolerance

Tags

2ICGWS | ICGWS | ICGWS 2023 | IVES Conference Series

Citation

Related articles…

UNRAVELLING THE ROLE OF LACTIC ACID BACTERIA ON SPARKLING WINE ELABORATION THROUGH METABOLOMICS APPROACH

Xinomavro is a red grape variety from Northern Greece (Protected Designation of Origin), known for the nice acidities, perfectly appropriate for sparkling wine production (Rosé and Blanc de Noir). The elabo- ration of sparkling wine requires technical as well as scientific skills. Although the impact of the yeast strains and their metabolites on the final product quality is well documented, the action of bacteria still remains unknown.
The present work focuses (i) on the population diversity of lactic acid bacteria isolated from sparkling wines and (ii) on the technological effect of the species during sparkling wine elaboration.

Optimization of in vitro establishment of grapevine varieties for fast micropropagation 

Micropropagation is an important alternative to conventional methods of plant propagation. The objective of this study was to optimize a protocol for in vitro micropropagation of selected grapevine hybrids (H19 and H20) that are included in our breeding program. For the sprouting initiation experiment, nodal cuttings with only one axillary bud from two hybrids were separated, disinfected, and cultivated in 50% Murashige Skoog nutrient medium (½ MS) and Woody Plant Medium (WPM), adding 4.4 µM benzyladenine (BA) in both mediums.

Genomic characterization of extant genetic diversity in grapevine

Dating back to the early domestication period of grapevine (Vitis vinifera L.), expansion of human activity led to the creation of thousands of modern day genotypes that serve multiple purposes such as table and wine consumption. They also encompass a strong phenotypic diversity. Presently, viticulture faces various challenges, which include threatening climatic change scenarios and an historical track record of genetic erosion. Paritularly with regards to wine varieties, there is a pressing need to characterize the extant genetic diversity of modern varieties, as a means to delvier knowledge-based solutions under a rapidly evolving scenario, that may enable improved yields and profiles, resistance to pathogens, and increased resilience to climate change.

Rapid measurement of phenolic quality as a useful tool for viticultural zoning

Un des principaux objectifs du zonage viticole est l’individuation des zones plus indiquées à la production de vins de haute qualité en relation aux cépages. Ceperrlant depuis beaucqup d’années, entre les paramètres de qualité du raisin, on n’a pas considéré les substances phénoliques par effet de l!l difficulté d’analyse en temps rapides.

PyExpress – A pipeline for fast and reliable UAV image processing in vineyards

Increasing drought poses a challenge to viticulture, with complex impacts on grape yield and quality. The use of Unmanned Aerial Vehicles (UAV) in Precision Viticulture offers a valuable tool to detect drought stress, capturing its spatio-temporal variability and thus, supports management strategies.