terclim by ICS banner
IVES 9 IVES Conference Series 9 Which potential for Near Infrared Spectroscopy to characterize rootstock effects on grapevines?

Which potential for Near Infrared Spectroscopy to characterize rootstock effects on grapevines?

Abstract

Developing rootstocks adapted to environmental constraints constitutes a key lever for grapevine adaptation to climate change. In this context, Near Infrared Spectroscopy (NIRS) could be used as a high-throughput phenotyping technique to simplify the study of rootstocks in grafted situations. This study is an exploratory analysis to evaluate the potential of NIRS acquired on grafted tissues to reveal rootstock effects as well as the plasticity of combinations of scion/rootstock to better characterize these interactions.
Through the study of 25 combinations (5 scions times 5 rootstocks) in a dedicated experimental vineyard, we showed that NIRS obtained from grafted tissues capture rootstock and scion/rootstock interaction signals, up to 20% of the total variance at specific wavelengths. Yet, the scion effect on the spectra remains dominant over the rootstock effect, which is also the case for agronomic traits. Using NIRS data on dried leaves, which were found to best capture the rootstock effect compared to measurements on wood or fresh leaves, spectral wavelengths specific to the rootstock effect could be identified.
Predictions at the vine level carried out on twenty-eight phenotypic traits showed that those related to phenology and vigor being were better predicted. Three spectral regions were consistently identified as contributing to predictions and to differences between scion/rootstock combinations. Using data from these regions yielded predictive models as accurate as those built with the entire spectral range, underlining that NIRS capture useful information related to the combination rootstock/scion which opens prospects towards the possibility of using this methodology in a breeding context.

DOI:

Publication date: June 14, 2024

Issue: Open GPB 2024

Type: Article

Authors

Marie-Gabrielle Harribey1, Jean-Pascal Tandonnet2, Marine Morel2, Virginie Bouckenooghe3,4, Elisa Marguerit2, Vincent Segura4,5, Nathalie Ollat2*

1 UMR BIOGECO, Univ. Bordeaux, INRAE, CIRAD, 33 Cestas, France
2 EGFV, Univ.Bordeaux, Bordeaux Sciences Agro, INRAE, ISVV, 33882 Villenave d’Ornon, France
3 IFV, 30240, Le Grau du Roi, France
4 UMT Geno-Vigne®, IFV, INRAE, Institut Agro Montpellier, 34398, Montpellier, France
5 UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro Montpellier, 34398 Montpellier, France

Contact the author*

Keywords

NIRS, phenomic prediction, rootstock, scion/rootstock interaction, field phenotyping

Tags

IVES Conference Series | Open GPB | Open GPB 2024

Citation

Related articles…

Gas Chromatography-Olfactometry (GCO) screening of odorant compounds associated with the tails-off flavour in wine distillates

The development of off-flavours in wine distillates, particularly those associated with the tails fraction, is a key issue in the production of high-quality spirits.

Autochthonous non-Saccharomyces extra-cellular metabolism of tryptophan, tyrosine, and phenylalanine

Amino acids are crucial nitrogen sources in yeast metabolism, influencing both biomass production and fermentation rate. The breakdown byproducts of amino acids contribute to the aroma of the wine and wine’s health benefit compounds. This study focused on the yeast’s extracellular metabolic profile of tryptophan, tyrosine, and phenylalanine belonging to the group of aromatic amino acids in experimental Maraština wines. Alcoholic fermentations were conducted on sterile grape Maraština must using seven autochthonous non-Saccharomyces yeasts in sequential fermentation with commercial Saccharomyces cerevisiae.

Growth in global table grape production and consumption is fueled by the introduction of new seedless varieties

Table grape consumption worldwide has experienced a remarkable growth in the first two decades of the 21st century, becoming the third most consumed fresh fruit in some countries, after bananas and apples. This increase has been attributed to several reasons, including the availability of seedless grapes, which has been a key factor in the increase in consumption.

Development and application of CRISPR/Cas in grapevine

The development and application of CRISPR (clustered regularly interspaced short palindromic repeats)/Cas (CRISPR-associated protein) technologies have revolutionized genome editing in plants due to its simplicity, high efficiency, and versatility. As an economically important fruit crop worldwide, grapevine genome editing using CRISPR/Cas technologies has also been reported these years. Here we introduce the development briefly of the most popular CRISPR/Cas9 system and also the state-of-the-art CRISPR technologies developed so far. Moreover, we summarize CRISPR/Cas9-mediated applications for gene functional study and trait improvement in grapevine.

Chitosan elicits mono-glucosylated stilbene production and release in fed-batch fermentation of grape cells 

In the present study, the optimal conditions of grape (Vitis vinifera cv ‘Barbera’) cell cultures in batch and fed-batch bioreactor processes were studied to specifically improve the production of mono-glucosylated stilbenes.